Manihot esculenta (cassava): 110607220
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Entry
110607220 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110607220
00071 Fatty acid degradation
110607220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110607220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110607220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110607220
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110607220
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110607220
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110607220
Exosomal proteins of breast cancer cells
110607220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110607220
NCBI-ProteinID:
XP_021601987
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Position
1:13739418..13748838
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AA seq
658 aa
AA seq
DB search
MAQMKYLIEVEKPKDALDGRPSVGPVYRSVFAKDGFPPPIPGMDSCWDIFRSSVEKYPDN
PMLGRREIVNGMPGQYVWITYKQVYDLVIKVGNSIRSRGVEPGGKCGIYGANCSEWIVSM
EACNAHGLFCVPLYDTLGVGAVEYIICHAEVSIAFVEEKKIPELLKTFPNSTKYMKTIVS
FGKVAPEQREQIENFGLTVYSWEEFLKLGEDKQYDLPVKKKSDICTIMYTSGTTGDPKGV
MISNDSIVTIIAGVNKILECVNEQLITKDVYLSYLPLAHIFDRVIEELFISHGASIGFWR
GDIKLLLEDIGELKPTIFCAVPRVLDRIRSGLMQKIASGSFLKQKLFNVAYSYKLKSMKK
GHSHDEASPLCDKIIFDKVKQGLGGNVRLILSGAAPLAIHVEAFLRVVSCAHVLQGYGLT
ETCAGTFVSLPNEMTMLGTVGPPAPNVDVCLESVPEMNYDALSSTPRGEICIRGKTLFSG
YYKQEDLTKEVLIDGWFHTGDIGEWQHDGSLKIIDRKKNIFKLSQGEYVAVENLENIYVL
ASAVDSIWVYGNSFESFLVAVINPNNNALENWAKEHGVGGDFNSLCENPKAKEYILGELS
KTGKEKKLKGFEFVKSVHLDPEPFDIERDLLTPTYKKKRPQLLKYYQDVIDKMYKSAS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatgaagtatcttatagaggtcgagaaaccaaaggatgctctggatgggagg
ccttctgttggtcctgtttatcgcagtgtctttgctaaggatggatttcctcctccgatt
cccggaatggatagttgctgggatattttccgctcaagcgttgagaagtatcctgacaat
cccatgcttggtcgacgggagattgtgaatggaatgcctggacaatatgtgtggataacc
tacaaacaagtatatgacttggtgatcaaagttggtaattcaattcggagccgtggtgtt
gaaccgggagggaaatgtggtatttatggtgcaaattgctcagaatggatagtaagcatg
gaggcctgcaatgctcatgggcttttttgtgttcctttatatgacaccttaggagttggt
gctgtggaatatatcatatgccatgcagaggtctcaattgcttttgtagaagaaaagaaa
attcctgagttgttgaaaacatttccaaattcaacaaaatacatgaaaacaattgtgagc
tttgggaaggttgcacctgaacaaagagaacagatcgagaactttggtttaacagtctat
tcctgggaggagtttttaaaactgggggaagataaacagtatgatctcccagtgaaaaag
aaaagtgatatctgtacaataatgtataccagtggtacaactggtgatccaaagggagta
atgatttcaaatgatagtatcgttactattatagctggggtgaacaagatacttgagtgt
gtgaatgaacagttgattacaaaggatgtatatctttcttaccttcctcttgcgcatatc
tttgatcgggtgattgaggagctatttatttcacatggtgcctctataggattctggcga
ggggatatcaaattattacttgaagacattggggagctcaaaccaactattttctgtgct
gtgccccgtgtattagatagaatacgttcaggtttgatgcagaagattgcttcagggagc
ttcttaaaacagaagttgttcaatgtagcatactcatacaaattaaaatctatgaagaag
gggcattcacatgatgaggcatctccactttgtgacaaaattatctttgataaggtaaaa
caaggcttgggcggaaatgtacggcttattctatctggagcagcacctcttgctatccat
gtagaagctttcctgcgggtggtctcatgtgctcatgttttgcaaggatatggtcttacg
gaaacctgtgcaggtacatttgtctcactaccaaatgaaatgacaatgcttggtacagtg
ggtcctcctgcaccaaatgtggatgtatgcctagaatctgttcctgaaatgaattatgat
gctctttcaagcactccacgtggagaaatttgtataagggggaaaactctgttttctggt
tactacaaacaagaagacctcaccaaagaggtccttattgatggatggttccatacagga
gatattggtgaatggcaacatgatggaagcttgaaaattattgaccgcaagaagaacata
tttaaactttcacaaggagaatatgttgcagttgaaaacttggagaatatttatgttctt
gcttctgcagttgattcgatatgggtttatgggaatagctttgaatcgttccttgtcgct
gttattaaccccaataataatgctcttgaaaattgggcaaaagagcatggcgtgggagga
gacttcaactccctttgtgaaaatccaaaggcaaaagaatacatacttggagagctctca
aagaccggcaaagaaaaaaagctaaaaggttttgaatttgtaaagtctgtgcaccttgat
ccggagccatttgacatagaacgcgacctccttactccgacttataagaaaaagaggcct
caattgctcaagtactatcaggatgttattgacaagatgtacaaaagcgcaagctaa
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