Manihot esculenta (cassava): 110607328
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Entry
110607328 CDS
T05761
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110607328
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110607328
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
110607328
NCBI-ProteinID:
XP_021602106
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Position
13:174848..187894
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AA seq
1251 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDIFQGNYVDHHVSTREQITLQDTMDGVVYSSSQFGLDERFGDGDASQVGLDLEEDL
FLDKVAATGSGEVSENDASMPVEPIPHPKIDTSHEGMTESSEDIPLNGTREKMEGFSANL
GGVDYAQAPSTPGLMEEPNVFSVKEGLVCEDHLEPEDQNLSECVRIGASENVATSDIHHR
DDAMDFSLGGHFNSNSSVCMHAEDSSHPSGELEVNQTRMEGDSLSTKVIAEYDPVDGNVG
VLDGFNKVEDANKVVLCNNEEPVPSIDGSGECDKSLGVRLRETDDVEITRNMEELHSNGK
PFVSNPIHSRESPSAPNSVNIEGQGCQGLEEVMNDNVNNEPIATACTSVLRTCSSRLSEP
DIASHDVGNSMVASDLQSVDTVPLSTELLEREEGFHASGTSTKVQVQECHKTDVVRSEEN
RISEATLSGEILADGGTQEDQLDKAISNDNQCEDLNSSLTSDLPAPEKLLFAPQRPLDRP
HDLLVETPDKQVQEEGDESGAGTKISVRKRSLTESSLTVQSVNSVESFSMTKSTRTLDSI
PDDDDLLSSILVGRRSSALKMKPTPPVPEVPPMKRARSSSRPSTLKRKVLMDDSMVLHGD
TIRQQLTNTEDIRRMRKKAPCTCTEILMIQRQFLEEGIFSEPVLTGMLAELSDLHSEAFD
LSRITVSENDDNNNASFEALDDEDSAKQNVNQHSGIEGSTEPGSCRNDLDGQFSETPIQN
DNQQVEDHFGSYDIGNQEHVNFITDAADYRTSEHEHLGKISEMEIDKLDAEVADATNHSA
QGFETPQREPLSGDIFEMTTGTLDQSDVMDKMIGSDDFMQMDASNMPSDKIDTQLVEEVA
SLRDMSKGRELDGIEFVDHSVGQIIANGTELRTEGIPLEENKAGVPTEVRDFHPEGCAPI
DDNFSSVNVDQAMDEIGNDKHGVLCEIGGLVVSSGLIDDKDQVSNPDQISNPLCNEESKM
DSVHLVGLGGDFKSTSMNGDTACEQAERQSIMDTENTQLDCVTTGDCGDFQDDAFANNTE
FLNVDDDEIGEDYEEGMPNAEDTRVLDNSGWSSRTRAVAKYLQTLFDKEAGHGRKVLPMD
SLLAGKTRKEASRMFFETLVLKTRDYVHVEQAKPFDNINIKPRAKLMKSDF
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagttcatattagccaagaaagggccattagggacaatatggatagcg
gctcatttagagagaaagcttcgaaagaaccaggtcgctgacactgatattggtgtctct
gtagattcaattctttttcctgaagtacctattgcacttaggttgtccagtcatcttctg
cttggtgtggtgaggatatattctagaaaggtgaattaccttttcgatgactgcagtgag
gctttgctgaagataaagcaagcttttcgttctactgcagttgatttacctccagaagaa
tcaactgctccatatcactccattacattgcctgagacttttgatcttgatgattttgag
ctgccagataatgacattttccagggtaactacgttgaccatcatgtcagtacaagggag
cagattacacttcaagacacaatggatggtgttgtgtactcatcatcgcagtttggtttg
gatgagcgttttggtgatggtgacgcttctcaagttggtttggaccttgaagaggacctc
ttcctagataaggttgcagcaacagggagtggtgaagtttctgaaaatgatgcttcaatg
cctgttgagccaataccacatccaaaaattgatacaagtcatgaagggatgactgaatct
tcagaagacataccattgaatggtactagagaaaagatggaaggtttttctgcaaatttg
ggaggcgttgactatgctcaggctccatctacccctgggttaatggaagagccaaatgtg
ttcagtgtcaaggaaggtctggtctgtgaggatcatttagaaccagaagatcagaattta
agtgaatgtgtacgaataggggcctctgaaaatgtcgccacgtcagacattcatcatagg
gatgatgccatggatttttctttaggtggtcatttcaatagtaattctagtgtgtgcatg
catgctgaagatagcagccacccttctggtgaattggaggtcaaccaaacaaggatggag
ggagattctctttctactaaagtgattgcagaatatgatccagtagatgggaatgttggt
gtactggatggtttcaacaaggtagaagatgcaaataaagttgttctgtgcaataatgaa
gagcctgtcccctctatagatggaagtggagagtgtgacaaatccttaggagttaggttg
cgagaaactgatgatgtcgaaatcaccagaaacatggaagaattacactcaaatggcaaa
ccttttgtgtcaaatcctatccactcaagggaatcgcctagtgctccaaactctgttaat
attgaaggtcagggttgtcagggacttgaggaagtaatgaatgacaatgttaataatgaa
ccaatagcaactgcttgcacaagtgtgctccggacatgcagttcccgtttaagtgagcct
gatattgcatctcatgatgttggtaattctatggttgcttctgacttgcaatcagtagac
actgtaccattgtcaacagagttgcttgaaagggaggaagggttccatgcttctggaact
tccactaaggtgcaagttcaagagtgccacaagactgatgttgtgcggtcagaggaaaat
cggatttctgaagccactttaagtggagaaattctggctgatggaggaacacaagaggat
caactggacaaggcaatctctaatgataaccagtgtgaagatctgaatagttccttgact
tctgatttgcctgcacctgagaagttgctttttgccccccagaggcctctggatagacca
catgatttactagttgagacacctgataaacaagtccaagaggagggtgatgaaagtggt
gcagggacaaaaatttctgtgagaaaacgaagtcttactgaaagctctttgactgtgcaa
agtgtaaattcagttgaatcattcagcatgaccaaatcaacgagaacactagattctatt
cctgatgatgatgacttgctatcttctatattagtcggaagaagatcttcagctttgaaa
atgaagccaactccacctgtgcctgaagtaccacctatgaagcgtgctcggtcttcgtct
cgaccttccacattgaagaggaaggtgctaatggatgattcaatggttttgcatggcgat
actatacgccaacagttgactaacactgaggacatccgtcgcatgaggaaaaaggcacct
tgtacatgcactgaaattttgatgattcaaaggcaattcttggaagagggaatctttagt
gaaccagtattaactggcatgttagcagaattgtcagatttgcacagtgaagcatttgat
ttgagcagaatcacggtttctgaaaatgatgacaataataatgcttcttttgaagcattg
gatgatgaagattctgccaagcaaaatgttaaccaacatagcggcattgaaggatccaca
gaacctggtagttgcagaaatgacttggatggacaattctctgagactcccattcagaat
gataatcagcaggttgaagaccactttggctcctatgatattggtaatcaagaacacgtg
aattttatcacagatgcagctgattatagaacttcagaacatgaacatttgggaaaaata
agcgaaatggaaattgataaattagatgctgaagttgctgatgccacaaatcattctgct
caggggtttgagacaccccaaagagagccactgtctggagatatttttgaaatgacaact
ggtactcttgatcagtcagacgtcatggacaaaatgattggttcagatgattttatgcag
atggatgcttcaaacatgccatctgataagattgatacacaactggtcgaggaagttgct
tccttaagggacatgagcaaaggcagagagcttgatggtattgaatttgtagaccattct
gtagggcaaattattgcaaatggaactgaattaaggacagaagggattcccttggaggaa
aataaagctggtgtaccaactgaagtcagggattttcatccagaaggttgtgcacctatt
gatgataatttcagttctgtaaatgtagaccaggctatggatgagattggaaatgataag
catggagttctttgtgagattggaggtttggttgtgagctcagggcttatcgatgataag
gaccaagtatctaatcctgaccaaatatctaatcctttgtgcaatgaagaatctaaaatg
gattctgtgcatctggtaggacttggtggagattttaaaagcacttccatgaatggagat
acagcatgcgaacaagctgagcgtcagagcatcatggatacagaaaatacacagcttgac
tgtgttacaactggtgattgtggtgatttccaagatgatgcatttgcaaataacacagag
ttcttgaatgttgatgatgatgaaataggtgaagactatgaggaaggcatgccaaatgct
gaagatactcgtgttcttgacaatagtgggtggtcttctcgcaccagagctgttgccaag
taccttcaaacgctatttgataaggaagcaggacatggaagaaaggtcctgccaatggat
agtctactagctggtaaaacccggaaggaggcatcaagaatgttcttcgagaccttggta
cttaaaacgagggattatgtccatgttgaacaggcgaagccttttgacaatatcaatata
aagccacgagcaaagctaatgaaatcagacttctga
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