Manihot esculenta (cassava): 110607441
Help
Entry
110607441 CDS
T05761
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110607441
Enzymes [BR:
mesc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110607441
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
90S particles
Helicases
110607441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
T4SS-DNA_transf
UTP25_NTPase-like
AAA_19
Motif
Other DBs
NCBI-GeneID:
110607441
NCBI-ProteinID:
XP_021602237
LinkDB
All DBs
Position
10:complement(178747..185401)
Genome browser
AA seq
532 aa
AA seq
DB search
MEKGTSFLFAGISFDKKKFANDFARFKDTKQGNGDGPTDDFNIGKRDPEDVAVSVRKRKR
KIAYVSEVVEGFNVFKSSKSVSLPFEEQNDQDEENQPSRKKKELNKQIEQDALLRKKHHI
HVSGSNSPSPLQNFAELSSRYGCDSYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACA
PTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELASQTTRECKRMAKGNKFRIKLMT
KELVRNADFSKLLCDILISTPLRLQLAICKKKVDLSRVEHLVLDESDKLFELGMLKQIDY
VVKACSNTSVIRSLFSATLPDFVEELARTIMHDAVRVVVGRKNTASDTINQKLVYAGSEE
GKLLALRQSFAESLNPPVLIFVQNKKRANELYEELKFDSIRVGVVHSDLAQKQRENAVDD
FRAGNTWVLIATDVVARGLDFKGVNCVINFDFPDSAAAYIHRIGRSGRAGRTGEAITFYT
EDDVLVLRNIANVMAASGCEVPSWIMALPKVKWRRHRPERESISTNPEDQEE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggaacctcctttttgttcgcaggtatcagcttcgataagaagaagtttgcc
aacgattttgcccgttttaaggatacaaaacaaggtaatggtgatggtccaacagatgat
ttcaatatcggaaaacgtgatccagaggacgtggcagtctcagttaggaagcggaaacga
aaaattgcgtatgtctcagaagtggtggagggattcaatgtctttaagagttcaaagtct
gtgtctttaccatttgaggaacagaatgatcaagatgaagaaaatcagccttccaggaag
aagaaagaattaaataagcaaattgagcaagatgcacttctaaggaaaaaacatcacatt
cacgtgtctgggagtaatagtccatccccgcttcaaaattttgcagaattatcctccaga
tatggatgtgactcatatttattacacaatttggctgaacttggatttaaggagccaaca
ccgatccaaaggcaggctattccagtactcctatctggccgagaatgctttgcttgtgct
cctactggatctgggaaaaccttggcttttgtttgtccaatgcttatgaaacttaagcat
gcatcaaaggatgggattagagccgttatcttgtgtcctacacgggaattagcttctcaa
accactagagagtgcaaaagaatggctaaagggaataaatttcgtattaagctaatgaca
aaagaacttgtgagaaatgctgatttttcaaagctgctgtgtgatattcttatatcaaca
ccacttcgattacaattagctatctgcaagaagaaggttgacttaagcagggttgagcat
cttgttttggatgaatctgataagctgtttgagcttggcatgttaaagcagattgattat
gtggtcaaagcatgctcgaacacctcagtaatacgttcactgtttagtgctactttacct
gattttgttgaagagcttgcacgtacaataatgcatgatgctgttcgagtggtggttggc
aggaagaatactgcttctgataccatcaaccaaaaattggtttatgctggaagtgaagaa
ggaaagctccttgcacttcgtcaaagctttgcggagagtctgaatccaccagtgttgatt
tttgttcaaaacaagaaacgtgcaaacgaactatatgaagaactgaaatttgacagtatc
agagttggggttgtccattctgatttggcccaaaagcagcgtgagaatgccgttgatgac
ttcagagctggcaacacgtgggtcttgattgcaactgatgttgttgcccggggtttggat
ttcaaaggggtcaattgtgtgattaattttgattttccagattctgctgctgcatatatt
cataggattggtcggtctggcagagcagggaggactggagaagctattactttctacaca
gaagatgatgttcttgttctgcgtaatattgccaatgtaatggcagcctcaggttgcgag
gttccgtcttggatcatggctttgcctaaagtgaagtggaggcggcaccgaccagaaaga
gaatcaatttcaaccaatccagaagatcaggaagagtaa
DBGET
integrated database retrieval system
