Manihot esculenta (cassava): 110607846
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Entry
110607846 CDS
T05761
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110607846
03021 Transcription machinery [BR:
mesc03021
]
110607846
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
110607846
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
110607846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
110607846
NCBI-ProteinID:
XP_021602705
LinkDB
All DBs
Position
2:complement(1196938..1199476)
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AA seq
502 aa
AA seq
DB search
MADTAIASLINVEPVPTKKPRNNRKALKQKNPSTNEVNIMAQKLSEISPVPPPPSDTDPL
KENHESLSQSRSSPKKSKAKAPKAKQTKQTSSFEKDMQEMQEMLQKLRIEKEKTEELLKE
KDEMLKAKEEELVTKGREQEKLQMEFKKLQKLKEFKPNMILPLVQSSQDDQDKKKKKKKG
GLEKKRPSPPYILWCKDQWNEVKKENPDAEFKEISNILGAKWKSVSAEEKKPYEEKYQAE
KEAYLQLIANEKREGEAMKLFEEEHKQKTAMELLEQYIQFKQEAEKENKKTKKEKDPLKP
KQPISAFFLFSNERRAALLSEKNVLEVAKIAGEEWKNMTEEERRPYEEMAKKNKEKYLQE
MEAYKQKKDEEAMNLKKEEEEMLKLQKQEALQLLKKKEKTENIIKKTKEKRQKKKQQNAD
PNKPKRPASSFLLFNKEARKCLMQERPGITNSTLNALISVKWKELSEEERQIWNVKAAEA
MEVYKKEMEEYNKSAASSDDKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctgatactgcaattgcctcgctcatcaacgttgagccagtccccacaaagaaacca
agaaacaataggaaagctctgaaacagaaaaacccatcaacaaatgaggttaatatcatg
gctcagaagctctccgagatctctcccgttccccctccaccatcagacactgatcctttg
aaagagaaccacgaaagcctctctcaatctcgctcttctcccaagaaatcgaaggctaag
gccccaaaggctaagcagacaaagcagacctcttcatttgaaaaggacatgcaagaaatg
caagaaatgcttcagaagttgaggattgaaaaggaaaagactgaggagttgctgaaggag
aaggatgagatgctgaaggccaaagaagaggagcttgtaaccaagggcagagagcaagag
aagttacagatggagttcaagaagttgcagaaactgaaggagtttaagcccaacatgatt
ctgccgcttgttcaatcatcgcaagatgaccaagacaagaagaagaagaaaaagaagggt
ggccttgaaaagaaaaggccatctccaccttacatcttgtggtgcaaagatcaatggaat
gaggtcaagaaagagaatccagatgcagagttcaaagagatctcaaacatcttgggggca
aagtggaagagtgttagtgcagaggaaaagaagccttatgaggaaaagtatcaggctgaa
aaggaagcctatctgcagttaattgcaaacgagaagcgagagggtgaagcaatgaagctg
ttcgaagaggagcataagcaaaagacagcaatggaattgcttgaacagtacatccaattc
aagcaagaagcagaaaaggagaacaagaagaccaagaaagaaaaggatccgctgaaacca
aagcagcccatttcagcttttttcttgttctcaaatgagagacgggctgctttactttca
gagaagaatgttctggaggtggcaaagattgctggtgaggaatggaagaacatgacggaa
gaagaaaggaggccttatgaagagatggcaaagaagaacaaggagaagtacttgcaagaa
atggaggcctacaagcagaaaaaggatgaagaagctatgaatctaaagaaagaagaagaa
gagatgttgaagcttcagaaacaggaagccctgcaactgcttaagaagaaggagaaaaca
gaaaacataatcaagaaaaccaaagagaaacgccagaagaagaagcagcagaatgctgat
cctaacaagcccaaaaggcctgcatcttcattccttctgttcaacaaagaagcaaggaaa
tgtttaatgcaggagcggccagggatcaccaactctacccttaatgcactgatttctgtg
aaatggaaggaacttagtgaagaagagaggcaaatctggaatgttaaagctgctgaagcc
atggaagtatacaagaaggaaatggaagagtacaacaaatctgctgcatcctcagatgac
aaaccataa
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