Manihot esculenta (cassava): 110608152
Help
Entry
110608152 CDS
T05761
Name
(RefSeq) probable CoA ligase CCL5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00592
alpha-Linolenic acid metabolism
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
110608152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110608152
NCBI-ProteinID:
XP_021603051
LinkDB
All DBs
Position
7:complement(29259730..29262230)
Genome browser
AA seq
570 aa
AA seq
DB search
MSFEESWPTAIEERTSNVERPSSDRSGFDPNTGIYHSLLQLGDNFQIPSRNDLDTCKYVL
SQFPHPDHAESRVALIDSATNYQVTYAQLDRSIRALASGLYHGLGVRKGDVVFVLSPNLI
LYPTICLAVFSIGAILSPANPINTQSEIAKQILDSGAKLVISAPEELHKVTKTGVPTLLT
TRISNEDSLSIEELIESCDPAEFPQVQINQSDIAAVLYSSGTTGISKGVILTHSNFIAIM
ILLKWSVYATSSQNDVFLCFIPMFHIYGLAFFGLGLFSAGITTVLMQRFDLQAMLDAIQA
YKVNNLPAVPPVILGLVKHVSKLRCDLSSLRRVGSGAAPLSKELTEEFREMFPWVELRQG
YGLTESCGAATFFVSDEQAKAHPGSCGRLIPTFNAMVVDISTGFALSPRKEGEIWIKSPT
IMKGYLQNEEATAAMLDSDGWLKTGDLGYFDEDGFLYIVDRIKELIKHNGYQVAPAELEA
ILLNHPQVIDAAVIPLEDEESGQIPMAYVVRAAGSELTEEQILQFVANQVAPYKKVRRVA
FISAIPKSAAGKILRKELVSHSQLQKISKM
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaagaatcatggccgactgccatcgaggagcgaaccagcaacgtcgaacga
ccgtcatccgaccggagtggttttgatccgaataccggaatttaccattcactgcttcaa
cttggcgacaatttccaaatcccatctagaaatgacttagacacttgcaagtatgtattg
tctcaatttccccatcctgaccacgctgaatccagagttgcacttattgattcagctact
aactaccaagtcacctatgcacaactcgaccgatcaatccgagccctagcctccggcttg
taccatggacttggggtccgaaaaggcgacgtggtgttcgttctgtcgccaaacttgatc
ctatatccaaccatttgtctagctgtgttttctataggagcaatcctcagtcctgccaat
ccaatcaacacacaatcagaaatagccaagcagatacttgactcaggtgctaaacttgtc
atctcagcaccagaggagctgcataaggttacaaaaactggggtgcctacactacttaca
actcgaatatctaacgaggattctctatccatcgaagaattaatcgaatcctgtgatcct
gcagagttcccacaagtccagataaatcagtcagatattgcagctgtactatactcttca
ggaactacaggcataagcaaaggtgtgatattaacacattcaaacttcatagctataatg
atactcctgaaatggtcagtgtatgcaacttcatctcaaaatgatgtgttcctgtgcttc
attccaatgtttcacatatacgggctcgcatttttcgggttaggattattcagtgcaggg
atcacaactgtgttaatgcaaagatttgatctacaagcaatgcttgatgcaattcaagct
tacaaagttaataacttacctgcagtgcctcccgtgatacttgggctagtgaaacatgtt
agcaagttaaggtgtgatttgtcatctttaagaagagttggctcaggagctgctcctttg
agcaaggaactgactgaagagttcagggagatgtttccatgggtggagctccggcaggga
tatgggttaacagaaagctgtggtgctgcgactttttttgtctccgacgagcaagctaag
gcacatccaggttcctgtggaagattaataccaacttttaatgctatggtagtagatatt
tcaacaggatttgctttatcacctcgtaaggaaggagaaatatggataaaaagccctact
attatgaaaggatacctgcaaaatgaggaagctactgctgctatgcttgattctgatggg
tggctgaaaactggcgatcttggttattttgacgaagatgggtttctttacattgttgat
aggatcaaggagcttatcaaacataatgggtatcaggttgctccagcagaattggaagca
atacttctgaatcatccccaagtaattgatgcagcagttatacctcttgaagatgaagaa
tcagggcagatacctatggcatatgtagtcagagcagctggttctgagctcactgaggaa
cagatccttcaatttgttgctaaccaggttgccccatacaagaaagttaggagagtagca
ttcatcagtgcaattccaaagtcagctgcaggcaaaatcctgaggaaagaacttgtttca
catagccaacttcaaaaaatttcaaagatgtag
DBGET
integrated database retrieval system