Manihot esculenta (cassava): 110608443
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Entry
110608443 CDS
T05761
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHA4A
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110608443
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110608443
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110608443
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_16
zf-RING_UBOX
zf-ANAPC11
Prok-RING_1
zf-C3HC4_3
zf-RING_4
Roughex
Motif
Other DBs
NCBI-GeneID:
110608443
NCBI-ProteinID:
XP_021603351
LinkDB
All DBs
Position
2:879846..881929
Genome browser
AA seq
242 aa
AA seq
DB search
MGFTPTATPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRPTSVSSPTQIL
PTSSNQSTQPVLSVCQIGLKKEIKDKLPIVLFDEELKTRESQCCVCLGEFEIKEELLQIP
SCKHVFHIECIHHWLHSNSTCPLCRSFVIPTTKLDNLAQSGGHETPIEQDNPNSNYHTQI
ASEQQQQQQQAEFSHSLVIPIEESSSAEACSMASAGSPELSISTENGRGCSSQESVAINI
QT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgggttttactcctactgcaacacctcctcatctttatcctcaagaacttcaacttaag
ctttaccaggctttcatattttcaattcctattctcttctccattatactgttcctcttg
ttttacttgttctatctcaagagaaggcctacctcagtctcatctcctactcagattctt
ccaacaagctctaaccagtctactcaacctgtgctctctgtttgtcagattggtttgaag
aaagagatcaaagataagcttccaattgtgttatttgatgaagaattaaagacaagagaa
tcacagtgttgtgtttgcttgggggaatttgagatcaaagaggagttgctgcaaatccca
tcatgcaaacatgtgtttcacattgaatgtattcatcattggctgcactcaaactcaaca
tgtccactttgtagatcttttgtcatccccaccaccaaacttgataatctggcccaatct
ggtggacatgagacacccatagagcaagataatccaaactccaactaccatacgcagatt
gcatcagaacagcagcagcaacaacaacaagctgagttcagccacagccttgtgatacct
atagaagaatcatcaagtgcagaagcttgttcaatggcatcagctggctcacccgagctt
tccatttccacagagaatggaaggggttgttcaagtcaagaatctgttgctataaatatc
caaacatag
DBGET
integrated database retrieval system
