Manihot esculenta (cassava): 110608780
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Entry
110608780 CDS
T05761
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110608780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110608780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110608780
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
110608780
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110608780
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110608780
Prokaryotic type
110608780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
110608780
NCBI-ProteinID:
XP_021603767
LinkDB
All DBs
Position
2:5778275..5794642
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AA seq
969 aa
AA seq
DB search
MALQVTLSGPFFISSCSAHRFNPLLFSQRRRCFPFSHWRFTRIKPRFFAVAASENGAFTS
PEIAKSFDFSSEERIYKWWESQGYFKPNFERGSDPFVIPMPPPNVTGSLHMGHAMFVTLE
DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRTELGREEFIKRVWEWKEK
YGGTITNQIKRLGASCDWTRERFTLDEQLSRAVIEAFIRLHEKGLIYQGSYLVNWSPNLQ
TAVSDLEVEYSEEPGFLYHIKYRVAGGSRNDFLTVATTRPETLFGDVAIAVHPKDERYSM
YIGRMAIVPMTYGRHVPIISDRHVDKDFGTGVLKISPGHDHNDYFLARKLGLPILNVMNK
DGTLNEVAGLYCGMDRFEARKQLWSELEETGLAVKKEPHTLRVPRSQRGGEVIEPLVSKQ
WFVTMEPLAEKALHAVEKGELTILPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIE
GKKCEEDYIVARNADEALEKAHKKYGKDVIIYQDPDVLDTWFSSALWPFSTLGWPDVSSE
DFKKFYPATVLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKTLG
NVVDPLDTIKDYGTDALRFTLALGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLQNLPS
QADTYAWETMLACKFDREEALLKLPLPECWVVSKLHILIDTVTASYDKFFFGDVGREIYD
FFWSDFADWYIEASKARLYHSGGNSAAPLAQAVLLYVFENVLKLLHPFMPFVTEELWQAL
PKRKGALIVSPWPQISLPQNANSIKKFENFQALTRAIRNARAEYSVEPAKRISASIVASE
DVIQYISKEKEVLALLSRLDLENVHFTDSPPGDANQSVHLVASEGLEAYLPLADMVDISA
ELDRLSKRLSKMQTEYEGLVDRLNSPKFIEKAPEDVVCGVREKAAEAEEKINLTKNRLSF
LRSSVSASQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcaagtgactctctctgggccattttttatttcttcttgttctgctcacaga
ttcaatcctcttctcttctcccaacgacgtcgttgttttcctttctcccactggcgtttc
actcgtatcaaacccagatttttcgctgttgctgcatcagagaatggtgcatttacatcc
ccagagattgcaaaatccttcgacttttcttcagaggaacggatatataaatggtgggag
tcccaagggtatttcaagccaaattttgagcggggaagtgatccttttgtgatacccatg
ccacctcctaatgttactggttcactgcatatggggcatgcaatgtttgtgactcttgag
gatatcatggttagatacaatcgaatgaagggaaggccaactctatggcttcctgggact
gaccatgctggtattgctactcagttggttgtagaaaaaatgcttgcatctgaaggaata
aaaaggactgaactgggcagagaagagttcataaaacgcgtttgggagtggaaagagaaa
tacggtggaactattacgaaccagattaagagactcggtgcttcctgtgattggacaaga
gagcgctttacccttgatgagcagctaagtcgagcggtaattgaggcctttatcaggctt
catgagaaaggtttaatctatcaagggtcttacttggttaattggtctcctaatctgcag
actgcagtttcagacttggaagtagaatattctgaagaacctggttttctatatcatatc
aagtaccgtgttgctggaggttcgaggaatgactttttgacagtagcaacaacacgccct
gaaacattatttggtgatgtagccattgcagttcatcccaaggatgaacgctattctatg
tatattggaaggatggcaattgtacctatgacatatggccgtcatgttcctattatctcc
gatcggcatgttgataaagactttgggactggtgtcttgaagataagccctggacatgat
cataatgattactttcttgctaggaagcttggtctcccaatacttaatgtgatgaataaa
gatgggacccttaatgaggttgctggactgtactgtggaatggatcgatttgaggcacgg
aaacaactgtggtccgaacttgaggagacaggcttggctgtgaaaaaggagcctcacact
ttgcgagttcccaggtcacaacgtggtggagaagtaatagaaccattagtaagtaagcag
tggtttgtaaccatggagcctttggctgagaaggcacttcatgcagttgaaaaaggagaa
ttaaccattctgcctgagagatttgagaagatatataatcattggctatcaaacattaag
gattggtgtataagcagacaactgtggtggggacaccgcatacctgtttggtacattgag
ggaaagaaatgtgaagaagattatatagttgcaaggaatgctgatgaagcccttgagaag
gctcataagaagtatgggaaagatgtcataatatatcaagacccagatgttcttgacaca
tggttttcaagtgccttgtggccttttagtactcttgggtggccagatgtatcatcagag
gattttaagaaattttatccagcaacggtgcttgaaactgggcatgacattttgttcttc
tgggtggcgaggatggtcatgatgggaatcgaattcactgggactgtgccattttcatat
gtttatcttcatggacttatccgggactcacaaggaagaaaaatgtctaaaacactgggg
aatgtagtagatccgcttgatacaatcaaggattatggtactgatgctttacgatttact
cttgctttaggaacagctgggcaggatcttaacttgtctactgagcggttgactgccaac
aaagctttcactaacaaactgtggaatgctggcaagtttgtgttgcaaaatttgcctagt
caagctgatacatatgcttgggaaactatgctggcttgtaagtttgacagggaggaggcc
ttgctcaagctacctttacctgaatgctgggtggtctcaaaacttcatatacttattgac
acagttactgcaagctatgataagttcttctttggagatgttggaagagaaatctatgat
ttcttctggagtgattttgctgattggtatatagaagccagtaaagctcgactttaccac
tctggaggtaattcagctgccccactggcacaggcagttctattgtatgttttcgaaaat
gtattgaagttgctgcatccattcatgccatttgttactgaagaactctggcaggcactc
cccaaaaggaaaggagctcttatagtatccccgtggccccagatatcacttccacagaat
gccaactcaataaaaaagttcgaaaatttccaagcattgactagagcaatccggaatgct
cgagcagaatactctgttgagccggctaaacgtatatctgcatccatagttgcaagtgaa
gatgtcatccagtatatatctaaagagaaggaagttttagctcttctatcacggctagat
ctagaaaatgttcattttacagattctcctccaggggatgccaaccagtcggtacatctc
gttgccagtgagggactagaggcatatcttccccttgctgatatggttgatatatcggct
gaacttgaccgcctctcaaagcgcctttccaagatgcaaacagagtatgaagggcttgta
gatcgcctcaattctccgaaatttatagagaaagctcctgaggatgttgtttgtggtgtt
cgagaaaaagctgcagaagcagaagagaagataaacctcacaaagaaccgtttgtctttc
ctcagatcttcagtctcggcatctcaatag
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