Manihot esculenta (cassava): 110608999
Help
Entry
110608999 CDS
T05761
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03430
Mismatch repair
mesc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110608999
03460 Fanconi anemia pathway
110608999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110608999
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110608999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF7694
Motif
Other DBs
NCBI-GeneID:
110608999
NCBI-ProteinID:
XP_021603988
LinkDB
All DBs
Position
2:complement(16655545..16684976)
Genome browser
AA seq
731 aa
AA seq
DB search
MEIEQSLSPVPVPKDPPKIHRLDESVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINV
VVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTYEDLQSIKSMGFRGEALASMTY
VAHVTVTTITEGQLHGYRVSYRDGVMVEQPKACAAVKGTQIMIENLFYNMIARRKTLQNS
SDDYSKIIDLLCRFSIHHINVSFSCRKHGAARADVHSVATSSRLDSIRSVYGVSVSRNLI
KIEASDSDPSSSVFDMNGFISNSNYIAKKTTMVLFINDRLVECSALKRALEIVYAATLPK
ASKPFVYMSIVLPPEHIDVNVHPTKREVSLLNQEIIVDKIQMAVESKLRSSDEAKIFHEQ
MGDPSPSCHLGTSKDLNDDSSPSASKSQKVPVNKMVRTDVLDPAGRLYAYFEAKPLQRNV
KNSTLTAVRSSVRQRRNPKETADLTSVQELINNIDLNCHSGLLDIVQHCTFIGMADDIFA
LLQHSTHLYLANVVNLSKELMHQQVLRRFAHFNAIQLSDPAPLPELIMLALKEEDLDPES
NENDGLKAKIAEMNTELLKEKAEMLEEYFCIYIDSYGNLSRLPVVLDQHMPDMDRIPEFV
LSLGNDVDWEDEKCCFQAIAAALGNFYAMNPPLLPNPSGDGLQFYKRRRPVISPNNDEDP
TDIGDVSVEDEIEHGLLSEAKTAWAQREWSIQHVLFPAMRLFFKPQASLATNGTFVKVAS
LEKLYKIFERC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaacaatcgttatcgcctgttccggttcccaaagatcccccaaagattcat
cgtctagacgagtcagtggtgaatcgaatcgctgctggcgaggtgattcaacggcccgta
tcggcagtgaaagagttggtggagaatagtctagatgctcactctacttctattaacgtt
gtcgtcaaggacggtggcctcaagcttatccaagtctccgatgatggtcacggtattcga
tatgaggatttgcctatactatgcgagaggcacaccacgtcgaagctgtccacttatgag
gatttgcagtcgataaagtcgatgggcttcaggggagaggcgttggctagtatgacctat
gtggctcatgttactgtcaccaccatcactgaaggtcagttgcatggctacagggtatct
tatagagatggtgtcatggtggaacagccgaaagcttgtgctgctgtgaaagggacccag
ataatgatagagaacttgttctataacatgattgctcggaggaagacactccagaattct
tctgatgattattcaaaaattatagacttgttgtgccggttttccattcatcacataaat
gtgagcttttcttgcagaaagcatggagctgccagagcagatgtacactcggtagcaaca
tcttcaaggctggattctatcagatctgtttatggggtctcagtttctcgcaatctaatt
aagatagaagcttcagacagtgatccctctagttcagttttcgatatgaatggcttcata
tcaaattctaattacattgcaaagaaaactacaatggtgctttttatcaacgatagacta
gtggaatgctctgctttgaagagagcccttgaaattgtttatgctgccaccttacccaaa
gcatcaaaaccttttgtatacatgtcaatcgtgttgccgcctgagcacattgatgtgaat
gtgcatccaacaaagagagaggtgagccttctgaatcaggaaataattgttgacaagata
caaatggctgtagaatcaaagttgaggagctcggatgaggcaaagatatttcatgaacag
atgggggacccttctccaagttgtcatttgggtacgagcaaggatttgaatgatgattct
tcaccctctgcatcaaaatcacaaaaagttcctgtgaataaaatggtaagaactgatgta
ctggatccagctggaaggttgtatgcttactttgaggccaagcctcttcaacgaaatgta
aagaattctaccttgactgctgtaaggtcctcggttaggcaaagaaggaacccaaaggaa
actgctgatctcactagcgttcaagagctgataaacaatattgacctcaactgtcattct
ggtctgttggacattgtacaacattgcacatttattggaatggcagatgatatttttgca
ttgcttcagcatagtactcatctatatcttgcaaatgtagtaaacttgagcaaagagctt
atgcatcaacaagttctacgccggtttgcacattttaatgctatacaactaagtgatcca
gcccctttgccggagctgattatgctggctttgaaggaggaagacttggatccagaatcc
aatgaaaatgatggcctaaaagcgaagattgccgaaatgaatactgagttgctgaaggaa
aaggctgaaatgctggaagaatatttctgcatttatattgactcttatgggaatttgtct
aggcttcctgttgtacttgaccagcacatgcccgacatggatagaatccctgaatttgta
ctttctttgggcaatgatgttgattgggaggatgagaagtgctgctttcaggcaattgca
gctgctcttggaaacttttatgcaatgaaccctcctctactgcccaatccatctggtgat
ggtttgcagttttataaaaggagaagacctgtaattagtcctaataatgatgaagatccc
actgatataggggatgtttcagttgaggatgaaattgagcatggtctgctctctgaggca
aagactgcatgggcccagcgtgaatggtcaattcagcatgtcttgtttcctgccatgaga
ctctttttcaaaccacaagcttcactggctacaaatggaacgtttgttaaggtagcttca
ttagagaaactttataaaatttttgagaggtgctaa
DBGET
integrated database retrieval system