Manihot esculenta (cassava): 110609018
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Entry
110609018 CDS
T05761
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110609018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609018
03051 Proteasome [BR:
mesc03051
]
110609018
Membrane trafficking [BR:
mesc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
110609018
Proteasome [BR:
mesc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110609018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
CSTF2_hinge
XPC-binding
Motif
Other DBs
NCBI-GeneID:
110609018
NCBI-ProteinID:
XP_021604015
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Position
2:8721822..8728126
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AA seq
545 aa
AA seq
DB search
MGGGNGAGDEVSESNGGGNEVTVNIRCSNGSKFSVGISLSSTVEAFKAVLAGKCDVPADQ
QRLIYKGRILKDDQTLHSYGLEADHTVHMVRGFAPAAAANTAPASNTGASNTVSTTTRAV
GSNEGGALGGSGFEASLFPGLGLGGSGGLFGAGLPEFEQVQQQLTRNPNIMREIMNMPVI
QNLMNNPEIMRNLIVNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNT
DRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMAGNTGGDNTNPFAALLGNQATDRSTN
PSTTSSESTTGSPAPNTNPLPNPWTAAGTGGAQINSPRSNTAADARPPAPAGLGGLGLPE
FDNMFGAMPDANGMSQLLQNPAISQMMQSLLSNPQYMNQMLGANPQFRSMLDSNSQFREM
MQNPEFLRQLTSPETMQQLLSFQQALLSQLGRQQSTQEPGQTGAGTGTPNNLGLEMLMNM
FGGLGAGSLAVPSRPNVPPEELYATQLSQLQEMGFFDTQENIRALIATAGNVHAAVERLL
GNSGL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggcaatggagctggagatgaggtcagcgaatcgaacggcggtgggaatgaa
gtcaccgtcaatatcagatgttccaatggatcaaaattttcggtaggcataagtctatcc
tcgacggttgaagcttttaaggccgtacttgctgggaagtgcgatgtgccggccgatcaa
cagcggctgatttacaagggtcggatcttgaaggacgatcaaacacttcatagctacggt
ttggaggcagatcacactgttcatatggttcgtggatttgcacctgctgcagcagccaat
acagctccagctagcaacactggagcttcaaatactgtttcaactactacacgagctgtt
ggttccaatgaaggtggagcacttggaggatctggttttgaagcttcactatttccagga
cttggtttgggtggtagcggtggtttgtttggagctggacttccagagtttgaacaggtg
cagcaacaattgactcggaatcctaacattatgagagaaatcatgaatatgccagtgatt
cagaatctaatgaataatcctgagatcatgcggaacttgatagtgaacaatcctcaaatg
cgtgaaattattgatcgaaatcctgagctagctcatatacttaatgatcctagcactctc
cgtcaaacacttgaagcagcaagaaaccctgaactcatgcgtgagatgatgcgcaacact
gacagagcaatgagcaacattgaatcttcacctgagggattcaacatgcttagacgcatg
tatgaaactgtccaggaaccatttttgaatgcaaccacaatggctggaaatactggaggt
gataacacaaacccatttgcagctcttctagggaatcaagctactgataggtcaactaat
ccatcaactactagttctgagtcaacaaccggatcccctgctccaaataccaatccactg
cccaacccttggacagctgccgggactggtggtgcccaaataaatagtccaaggtcgaat
actgctgcggatgctaggccgccagcgcctgctggactaggaggacttggtctcccagag
tttgataacatgtttggtgctatgcctgatgctaatggaatgagtcagttgttgcaaaat
ccagcaatttcacaaatgatgcaaagtctcctttccaatcctcagtacatgaaccagatg
cttggtgctaatcctcaattccgcagcatgcttgattcaaattctcaatttagagaaatg
atgcaaaacccagaatttcttcgtcaattgacttctcctgagacaatgcagcaacttctg
tctttccagcaagctctgctttctcagcttggtcggcagcagtcaacccaagaaccaggt
caaacgggtgcaggaacaggaacacctaataatttgggtttagagatgttgatgaacatg
tttggtggccttggggctggcagccttgctgttccgagcagaccaaatgtgcccccagag
gaactttatgcaacccagttgtcacagcttcaagaaatgggtttcttcgacactcaagag
aatatacgggcgctaattgccactgctgggaatgtccatgctgcagtggagcgacttttg
gggaattctggtctgtaa
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