Manihot esculenta (cassava): 110609037
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Entry
110609037 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110609037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110609037
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110609037
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110609037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
110609037
NCBI-ProteinID:
XP_021604043
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Position
2:complement(10986725..10990374)
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AA seq
331 aa
AA seq
DB search
MELDGSECVSSSDGLDEDEIHPHNLHHHHHQFSSSKPHNAGANNNNNANNVVGPTGIVPA
TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVA
ESLELPCKYCNLGCPEIFPYYSKLKHEVVCNFRPYNCPYAGSECSTVGDISFLVSHLKDD
HKVDMHTGCTFNHRYVKSNPHEVENATWMLTVFNCFGQYFCLHFEAFQLGVAPVYMAFLR
FMGDETEARSYSYSLEVGANGRKLIWEGSPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG
DRKELKLRVTGRIWKEQQNSEVDVCIPNLCS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagttggacggtagcgagtgtgtttcatcctctgatgggttggatgaggatgagatc
catccccacaatcttcatcatcatcaccatcaattttcttcatcaaagcctcacaatgcc
ggcgccaataataacaataacgccaacaatgtagtcggtcccactggaatcgttccggcc
accagcgtccatgagttgctagaatgccctgtttgcaccaattctatgtacccaccaatc
catcagtgtcataatggacacacactgtgttcaacctgtaaagcaagggtccacaatagg
tgccccacttgtcggcaggagcttggagatattaggtgtttagcgctagagaaggtggct
gagtcacttgaattgccatgcaaatattgcaacttggggtgtccagagatattcccatat
tacagtaaactcaagcatgaggtagtttgcaacttcaggccatataattgcccatatgct
ggttcagaatgctcgactgttggagatatttctttccttgtttctcatttgaaagatgat
cacaaggtggacatgcacacaggatgcactttcaaccatcgttatgtcaagtcaaatccc
catgaggtggagaatgcaacgtggatgctgacggtgtttaattgttttggccaatacttc
tgccttcactttgaagcctttcagcttggtgtggctcctgtgtacatggcattccttcgt
ttcatgggtgatgagactgaggctaggagttatagctatagccttgaggttggggcaaat
ggcaggaaactcatctgggagggttctccacgaagcatccgagatagccatcggaaggtg
agggatagtcatgatggcctcattattcaacgaaacatggcacttttcttttctggaggt
gataggaaagaactaaagcttagagttactggaaggatatggaaggaacaacaaaattct
gaagttgatgtgtgcataccaaatctttgtagctaa
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