Manihot esculenta (cassava): 110609120
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Entry
110609120 CDS
T05761
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110609120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110609120
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110609120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110609120
NCBI-ProteinID:
XP_021604161
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Position
2:complement(8809698..8823243)
Genome browser
AA seq
1193 aa
AA seq
DB search
MGSIKPLPEAVRNLMRSGIILFDLSRVVEELVFNSLDAGATKVSVYVGVGTCYVKVVDDG
CGISRDGLVLLGERHVTSKLHHLADMHAANWSFGFRGEALASISDVSLLEIVSKARGRPN
GYRKVLKGSKGLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKYLQSSTKKVLDSVKKCVLR
ISLVHSTVSFKVVDIESEDELLCTRPSSALSLLMSHFGINDSSFLLELNFSESVLKLSGY
ISGPCDSLTVKAFQYVYINSRFVCKGPIHKLVNHLASRFECLDPWKANSMPQKGKRYKSQ
ACPAYILNLGCPLALYDLAFEPSKTYVEFKDWTPVLNFIGKSIQQLWRENVNYGESLAHV
TDICRKDEIWKEDFSGNPRFPIKKCEIQKDKPSHPHSPSHYLMQNKEVVSIYSGESAKIP
CKKFCMNISEFKEWESDLCHCHSACSLQSWNDSLSKHIYTVAQKSDNHLLTSNGNNCLPD
DFFMENRFTANERFNNHEEGNILGVECDESPKITSAEMNESYRSEFSLDYHKFGNDLEVS
KSNEKPFLQSCSLQTNLMLHSSLFSSKEDLEFPIDGFRTKKRRVCTDENVDINVDASNDI
LDTYPGTLLQHEASCSQKFSSHCIGIDMPVDFDSRSKASANSFSLHGKLFAEEKARAVEP
FLDENAYEWREGLGKFANNWHDGDSQAREGNHSYKMESKSYSKEDFISSCTSMLDLKDYA
DTTRDFSKFLQGHNVTEESSSAEHSDRTTSEINWLRLDLPFRSCKSDNKYESRENQLGRK
DWKQFNFPKQPYRRSRSAPPFYRQKTRFISLRHHSMMKEGNVQLFHDDLTSPENDDLKRP
HFHPNYAEDLMFCSWPNVSSGQGTMLDMKDIKQGANLRHSQYLQSHASPVEEEIQYSADY
ASKWRNGCHQIANNNVLHNIDNQHDILDISSGFLHLAGNSLVPESLHRNCLEDAKVLQQV
DKKFIPIVAGGMLAVIDQHAADERIRLEELRQKVISREAKTVTYLDAEKELILPEMGYQL
LHSYAEQIRDWGWIFNTEAQGSSSFKMNLNILHQEPNGVTLLAVPCILGVNLSDSDLLEF
LQQLADTDGSSTMPPAVRRILNFKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHG
RPTTAPLVNLEELHKQISKLGASDDGSNKLWHGLCRQELSFRRAAERLRTARG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggggagtattaagccattgccagaggctgttcgtaatttgatgcgttctggaattata
ttgttcgacttgtcgcgggtggtcgaagagctggtttttaacagtttggatgctggtgct
actaaggtgtcggtctatgtgggtgttggcacctgctatgtaaaagtagtggatgatgga
tgtggcatctctcgggatggattggttttgttgggagaaagacatgtgacatcaaagctt
catcatctggctgatatgcatgctgctaattggagttttggcttccggggagaagcattg
gcttctatttctgatgtctctttgttagaaattgtatcaaaagctcgtgggaggccaaat
ggatatcgtaaagttctgaagggatcaaaaggtttatatcttggagtcaatgatgatcgg
aaagatgttggcacaactgttgttgtacgtgatttattttacaaccaacctgttcggaga
aaatatttgcagtcaagcaccaagaaggttttggactcagttaaaaaatgtgttcttcgg
atttcacttgtgcattcaacagtttccttcaaagttgttgatattgaaagtgaggatgag
cttctatgcacacgtccttcttctgcattgtcactactgatgagtcactttggcatcaac
gattccagctttcttcttgaattgaactttagtgagagtgtattaaagctttctggctat
atatctggtccttgtgatagtttaactgtcaaggctttccaatatgtttatatcaactca
aggtttgtctgcaaaggtccaatacacaaactggtaaatcacttagcctctaggtttgaa
tgtctggatccttggaaagctaatagcatgcctcaaaaaggaaagagatataagtcccaa
gcatgtccagcctatattctaaatctaggttgccctttggctctctatgatttagccttt
gagccttcgaagacatatgttgaattcaaggattggactcctgtacttaattttattggg
aaatccattcaacaactttggagggaaaatgtgaactacggggaatccttggctcatgta
actgatatatgcaggaaagatgaaatctggaaggaagatttttcagggaatcctagattt
ccaataaaaaagtgtgagattcaaaaagataagccctctcacccccattctccttcccat
tacttgatgcaaaacaaagaggttgtctctatttatagtggagaaagtgccaaaattcca
tgtaaaaagttttgcatgaacatttcagaattcaaagaatgggaaagtgatttgtgccat
tgtcatagtgcctgctctttgcaatcatggaatgactcgctttctaagcatatatacaca
gtggcccaaaagagtgacaatcatctcttgacatctaatggcaataattgtttgccagat
gattttttcatggagaatagatttactgctaacgaaagattcaacaatcatgaagagggc
aatatcttgggcgtagagtgtgatgagtccccaaaaatcacatctgctgaaatgaatgaa
tcttataggagtgaattttctttggattatcacaaatttggaaatgacttagaggttagc
aagagcaatgaaaaacctttcttgcagagttgctccttgcaaacaaacctgatgcttcat
agttctttgttttcaagtaaagaagatcttgaatttccaattgatggcttcaggaccaag
aaaagaagggtttgcactgatgaaaatgttgacatcaatgttgatgctagtaatgacata
ttagatacatatcctgggactttgctgcagcatgaggcatcatgctctcagaagttctct
tcacattgcataggaattgacatgcctgtagattttgatagtcggtcaaaagcctctgca
aattcattttcattgcatggaaagctttttgctgaagagaaagctagggctgttgaacca
ttcctagatgagaatgcttatgaatggagagaaggattgggtaaattcgcaaataattgg
catgatggagatagtcaagcaagggagggaaaccatagttacaaaatggaatcaaagagc
tatagcaaggaagacttcatctcaagctgtacaagtatgttagatttgaaggactatgct
gataccaccagagatttcagcaaatttctccaaggtcacaacgtaactgaggaatcatca
tctgcagaacattctgatagaacaactagtgagattaactggttacgtttagatttgcct
tttagaagttgcaaaagtgataacaagtacgaaagtcgagaaaatcaacttggacgtaaa
gattggaaacaatttaattttcctaaacaaccatacagaagaagtcgatcagcgccccca
ttttacagacagaagacaaggtttatttccctaaggcatcattctatgatgaaggaggga
aatgtgcagttgttccatgatgaccttacttctccagaaaatgatgacctgaagcgtcca
cattttcacccaaattatgcagaggatttaatgttctgctcttggcccaatgtgagcagt
gggcaaggcactatgcttgacatgaaagatattaaacaaggtgcaaatctcagacactca
caatatctccagtctcatgcttctccagttgaagaggaaattcagtactcagctgactat
gcgtctaaatggcggaatggctgtcaccaaattgcaaacaacaatgtgttgcacaatatt
gacaatcagcatgatatccttgacatctcttcaggatttttgcatcttgctggcaattca
ttagtgccagaatctttgcataggaattgccttgaggatgccaaagttcttcagcaggtg
gacaagaaattcatcccaattgtggctggagggatgcttgctgttatagaccaacatgct
gcagatgagaggattagactggaggaacttcgtcaaaaggtaatatctagagaggctaag
acagttacctatttggatgctgaaaaagagctgatccttccagagatggggtatcagctg
cttcatagttatgctgaacaaataagagattggggttggatcttcaatactgaagctcaa
ggttctagtagctttaagatgaatttaaatattcttcaccaggagccaaatggggtcact
cttcttgcggtgccctgcattttaggggtcaatttatctgacagtgacctattagaattt
cttcagcagcttgctgatacagatggctcttctacaatgcctccagctgtccgtcgtatc
ctaaattttaaagcatgcagaggtgcaatcatgtttggagattctttgttaccatcagag
tgtgcgctcattgttgaagagctaaagcagacttcactttgttttcaatgtgctcatggg
cgaccaaccactgccccccttgtcaacttggaggaacttcataaacagatatctaaactg
ggagcatcagatgatggctcaaataagttgtggcatggtctgtgtcggcaggagctcagt
ttcagacgtgctgcagagcgtttgaggacagctagaggttag
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