Manihot esculenta (cassava): 110609169
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Entry
110609169 CDS
T05761
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-activating enzyme E1 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110609169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110609169
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110609169
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
110609169
Ubiquitin system [BR:
mesc04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
110609169
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110609169
Exosomal proteins of other body fluids (saliva and urine)
110609169
Exosomal proteins of colorectal cancer cells
110609169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
110609169
NCBI-ProteinID:
XP_021604246
LinkDB
All DBs
Position
2:complement(28192164..28213957)
Genome browser
AA seq
1136 aa
AA seq
DB search
MWKLKLGLWLIILVPVIVGLMCASGRLSGXVSIVTISLGFCGLLGSLLHFMLPKKRPAEG
VLIAEEEENGSETTGSPSIKKHRIGCVLESTAHAITSATSTTINNCSVVGSNRSSGLIMA
PGDANLSDIDEDLHSRQLAVYGRETMRRLFASNVLVSGMQGLGAEIAKNLILAGVKSITL
HDEQTVELWDLSSNFIFSENDVGKNRALASVQKLQELNNAVVVSTLTTKLVKEKLSDFQA
VVFTDVNLEKAIEFNDYCHSHQPPISFIKAEVRGLFGSVFCDFGPEFTVFDVDGEDPHTG
IIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIINARPYSFTLDE
DATNFATYEKGGIVTQVKQPKVLNFKPLREALKDPGDFLLSDFSKFDRPPLLHLAFQALD
KFLSELGRFPVAGSEEDAQKLISFAAIINDSSGDGRVEDIDPKLVRLFAFGARAVLNPMA
AMFGGIVGQEIVKACSGKFHPLFQFFYFDSVESLPTENLDASDFQPINGRYDAQISVFGS
KLQKKLEDANVFIVGSGALGCEFLKNVALMGVSCGKEGKLTITDDDVIEKSNLSRQFLFR
DWNIGQAKSTVAAAAAASINPNLNIEALQNRVGPETENVFDDAFWENLTVVINALDNVNA
RLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHN
IDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTAMTNAADAQARDTLERVLECFDKEK
CETFQDCITWARLKFEDYFANRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLEFSASDP
GHLHFIMSASILRAETFGIPLPDWVKNPKMLAEAVEKVIVPEFQPKKNVKIVTDEKATSL
AAASADDVVIINELIMRLEQCRKNLPRGFRMKPIQFEKDDDTNFHMDLIAALANMRARNY
SIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGRHKLEDYRNTFANLALPL
FSMAEPVPPKVIKHRDMKWTVWDRWIIKNNPTLRELLQWLKDKGLNAYSISCGSCLLYNS
LFPKHRERMDRKVVDLVREVAKVELPPYRSHFDVVVACEDDEDNDIDIPTVSIYYR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcttaaactagggctatggttgataattttggtgccagttattgtgggatta
atgtgtgccagtggtagattatctgggngtgtttccatcgtaacgatttcattagggttt
tgtggcttgttgggcagtttactgcactttatgcttccaaaaaagcgaccagctgaaggc
gtgcttatagcagaagaagaagagaacggaagcgaaacaactggttctccctccattaag
aagcatcggatcggttgcgttttggaatcaacggcacacgcaattaccagcgctacatcc
accaccatcaataattgtagcgttgttggcagcaaccgtagcagcggtttgattatggct
cctggtgatgcgaatctgagtgatattgatgaggacctgcacagccggcagctcgctgtg
tatggccgtgagaccatgcggcggctttttgcctctaatgttctagtctcgggcatgcag
ggtcttggtgctgagattgctaaaaaccttattctcgctggggtcaagtctataacattg
catgatgaacagacagttgaattgtgggatttgtccagtaatttcattttttctgagaat
gatgttggcaagaacagagcattggcttctgttcaaaagctgcaggaactcaataatgca
gtagttgtttccaccttaactacaaaattggtaaaagaaaagctttctgatttccaggct
gttgtttttaccgatgtcaaccttgagaaagccatcgagtttaatgactattgccacagt
catcagcctcctatctcttttattaaggctgaggttagaggtctttttggttctgtgttt
tgtgacttcggacctgaattcaccgtttttgatgttgatggagaggatccacacacgggt
atcattgcatccataagcaatgacaaccccgctttagtgtcatgtgtggatgacgagaga
ctggagtttcaggatggggatcttgttgtattttctgaagttcatggaatgacagagcta
aatgatggaaaaccaaggaagattataaatgctaggccatattcgttcactcttgatgag
gatgccacaaactttgctacctatgagaaaggtggtattgtaacacaggtgaaacaacca
aaggtgttgaactttaagccattgcgggaagcacttaaagatcctggtgacttccttctt
agtgatttttccaagtttgatcgcccgcctctcctacacctagcatttcaagcactggat
aagtttttgtcagaattaggtcgcttccctgttgctggttcagaagaggatgcacagaag
cttatatcttttgctgctatcatcaatgatagctcgggagatggaagagtggaagacatc
gatccaaaacttgtgcgattgtttgcctttggtgccagggctgtactgaatcccatggct
gctatgtttggtggtattgtgggacaagagattgtcaaagcatgctctggaaaatttcac
cctctatttcagtttttctattttgactcggtggagtcacttcctacagagaatttggat
gctagtgactttcaaccgataaatggtcgttatgatgcgcaaatttcagtttttggatct
aagctccagaagaaattagaggatgccaatgtttttattgttggatctggtgcattaggt
tgtgaattcttgaaaaatgtagcattaatgggtgtttcatgtggtaaggaagggaagctg
acaataactgatgatgatgtgatagagaaaagtaacttaagcagacagttcctcttccgt
gattggaacattgggcaggccaaatccacagttgctgcagctgctgctgcttcaataaat
ccaaatctcaacattgaagcattgcaaaatcgtgtgggtcctgaaactgagaatgtcttt
gatgatgcattctgggagaatttaaccgttgttataaatgctttggacaatgtcaatgca
agactatatgttgatcagagatgcttatacttccagaagccacttctcgagtccggaacc
ctgggtgccaaatgcaacacccagatggtcattcctcacctgaccgaaaactatggtgcc
tctagagacccacctgagaagcaagcccccatgtgcacagtccattcattcccacacaat
attgaccactgcttgacatgggctcgatccgaatttgaaggtttgcttgagaaaactcca
gcagaagttaatgcctatctatcaaatcctgtcgaatatacaactgctatgactaatgcc
gcggatgctcaggcaagggataccttggaacgtgtccttgagtgttttgacaaggaaaag
tgtgagacattccaggattgcattacatgggctcgattgaagtttgaagattattttgct
aatcgtgtgaagcagttgatttttacatttcctgaagatgctgcaaccagtactggggct
ccgttctggtctgcgccaaagcggtttcctcatccacttgagttctcagcttctgatcct
ggtcacctccactttatcatgtcagcatccatacttcgagcagagacttttggcatccca
cttcctgactgggtcaagaatcctaagatgctggccgaggcagttgagaaggttatagta
ccagaatttcaaccaaagaagaacgtgaaaattgtgacagatgagaaggctactagtctt
gccgctgcatctgcagatgatgtagtaattatcaatgaattaatcatgagattagagcag
tgtaggaagaatttgccacgaggattccggatgaagccaattcagtttgagaaggatgat
gataccaacttccatatggatctgatagccgcgcttgccaacatgagagcaagaaattac
agcattcctgaggtcgacaagctgaaagccaagtttattgccggaaggatcattcctgct
attgcaacctcgacagcaatggcaactggtcttgtgtgcttggagctttacaaggttcta
gatgggaggcacaaactggaggactatcgcaatacatttgccaatctagcactacctttg
ttctccatggctgagccggtcccacctaaggttattaagcatcgtgacatgaaatggact
gtttgggacaggtggatcataaaaaacaatccaactttgagggaactccttcagtggctc
aaggacaaggggttgaatgcttatagcatatcatgtgggagttgcctgctctacaatagc
ttgttccctaagcacagagagagaatggacaggaaggttgtggatttggttagggaagtg
gcaaaagtagaattgcctccgtaccgttctcatttcgatgttgttgtggcatgtgaagat
gatgaggacaatgacattgacattcctacagtatccatatactaccgttaa
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