Manihot esculenta (cassava): 110609201
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Entry
110609201 CDS
T05761
Name
(RefSeq) transcription initiation factor TFIID subunit 15b isoform X1
KO
K13098
RNA-binding protein FUS
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110609201
09122 Translation
03015 mRNA surveillance pathway
110609201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110609201
Spliceosome [BR:
mesc03041
]
Complex A
Other components
Complex A specific factors
110609201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
110609201
NCBI-ProteinID:
XP_021604314
LinkDB
All DBs
Position
2:complement(31640636..31645372)
Genome browser
AA seq
458 aa
AA seq
DB search
MYGQDGESAPPSYGGYGGGSASGGGGGGGGGGYGGGASGGGYGGDGGYGSRGGRGGGGGG
RGYGGNSQNRGYQGGDRGGRGGGGGGRGGGRGGGGRDGDWLCPNPSCGNLNFARRVECNK
CGTPSPAGASNDRGNGAGGGYNRGSGGYGGNRGGRGGNYDGNRSSNYNDGGRGGSYDNRS
GGGSRGGSYGGNHGRDDGSYNQMPPPEIPSYGSASGNYPPPPNSYGGNANYGMEAVPPPQ
SYTGGPTSFPPSYGGPVSGYGGDAPADVRTGGRGGPSGGYGSGGSRYEGGRGFGSAGTDA
SAKIKQCDGNCDDTCDNSRIYISNLPPDVTTDELRELFGGIGQVGRIKQKRGYKDQWPWN
IKLYTDEKGNNKGDAVLSYEDPSAAHSAGGFYNNYDMRGYKISVAMAEKTALRSQPSYDH
GGGGRGGYGGGDRRRDSYRDGGSGPDRHHHGGNRSRPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcaagacggcgaatctgctcctccatcttacggaggatatggcggtggcagc
gctagtggcggcggcggcggcggaggaggaggaggatatggaggaggggcaagtggtgga
ggctatgggggtgatggtggttacggcagccgtggtggtagaggtggcggcggcggcggc
agaggatatggtggtaattcgcaaaatcgtgggtatcaaggaggagatcgtggaggaaga
ggcggtggaggtgggggccgaggaggtggccgaggtggaggcggaagggacggtgattgg
ctgtgccctaatccaagctgtggcaatttgaactttgcaagaagagttgaatgtaacaaa
tgcggaactccctcccctgccggtgccagcaatgatcgtggaaatggtgcgggaggaggt
tataacagaggaagtggaggatatgggggtaaccgtgggggtagaggtggtaactatgat
ggtaatagaagtagcaattacaatgatggaggcagaggcggtagttatgataataggagt
ggtggtggcagtagggggggctcctatggtggtaatcatggaagagacgatggttcttat
aatcagatgcctccccctgaaatcccatcttatggtagtgctagtggtaattatccacca
ccacctaactcttatgggggcaatgcaaattatggaatggaagcagttcctccccctcaa
agttacactggtggacctacatctttcccaccatcttatgggggtcctgtgagtggttat
ggtggtgatgctcccgctgatgtgaggactggtgggcgaggtggcccttctggtgggtat
ggtagtggtggttctcggtatgaaggaggacgtggtttcggcagtgctggcactgatgcc
tcagctaaaattaagcagtgtgatggaaattgtgatgatacttgtgacaactctagaata
tacatatcaaatttgcccccagatgtgactactgatgaattgagagaactctttggcggc
attggacaagttggaaggattaagcagaagcggggctataaagatcaatggccctggaat
ataaaattgtacacagatgagaagggaaacaacaaaggtgatgcagtattgtcttatgaa
gatccatctgctgcacattctgccggcggtttttataataattatgatatgaggggttat
aaaataagtgttgcaatggcagaaaagacagctctaaggtctcaaccttcatatgatcat
ggaggtggtggtagaggtggatatggtggaggtgataggcgccgggatagttacagagat
ggaggctctgggccagataggcaccaccatggtggaaaccgttcacgtccatactga
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