KEGG   Manihot esculenta (cassava): 110609224
Entry
110609224         CDS       T05761                                 
Name
(RefSeq) F-box protein SKP2A isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110609224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mesc04121]
    110609224
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     110609224
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_Zer-1 F-box
Other DBs
NCBI-GeneID: 110609224
NCBI-ProteinID: XP_021604350
LinkDB
Position
2:13649136..13653459
AA seq 405 aa
MLICHMETRNSLLIIPGGSGFRIKSEMVGEAELRSENLNQCFERLMTVAGGNSGIGGGIS
EGGVKMEGVVITEWKDIPIELLLRIVSLVDDRTVIMASGVCSGWRDALCLGLTHLSLSWC
KNNMNNLVLSLAPKFTKLETLVLRQDKPQLEDNAIGAIANYCHDLQNLDLSKSFKLSDHS
LYALAHGCPKLTKLNISGCTAFSDGALEYLTNFCQKLKILNLCGCVKAATDHALQAIGRN
CSQLQSLNLGWCENVGDLGVMSLAYGCPDLRTLDLCGCVCITDDSVIALAYRCLHLRSLG
LYYCRNITDRAMYSLVHSRVKNKPPMWQSMKDRCNEEGLRSLNISQCTALTPPAVQALCD
SFPALHTCSWRHSLVMSGCLNLTSVHCACAVQAHRTMSSIPNPAH
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgctgatttgccacatggaaacaagaaattctcttttaataattcccggtggtagcggt
ttcagaattaagagtgaaatggtgggtgaagcagaattgaggagcgagaacttgaatcag
tgctttgagaggctgatgacggttgctggtggaaatagtgggattggtggtgggattagt
gagggaggagtgaaaatggagggagtggttatcaccgagtggaaagatatccctattgag
ctcttgctgcgaattgtttctcttgttgatgatcggaccgtgataatggcttctggggtt
tgcagtgggtggagggatgctctctgcttgggcctcacccatctctctctctcctggtgc
aaaaacaacatgaacaacttggtcctatcccttgctcctaaattcacaaaactggaaact
ttggttctgcgccaagataaaccacaactggaggataatgccattggggctattgccaat
tactgccatgatctgcagaacctggatctaagcaaaagctttaagcttagtgatcattcc
ctgtatgcattagctcatggttgtcctaaacttaccaaacttaacatcagtgggtgcact
gcatttagtgatggtgctcttgaatatctgactaacttttgccagaaattaaaaattttg
aatctttgtggatgtgtaaaggctgcaactgaccatgctttgcaggctattggacggaac
tgtagtcagctgcaatctctgaatctgggatggtgtgagaatgtgggtgatcttggagta
atgagtctagcatatggttgccctgatctcaggactcttgatttatgtggatgcgtctgt
ataacagatgatagcgtgattgctttggcatatagatgtctccatctgagatcccttggc
ctgtactactgtcgaaatatcacagacagggcaatgtattcactggttcatagccgagtg
aagaacaaacctccaatgtggcaatccatgaaggataggtgcaatgaggaaggattgcgg
agtctcaacatcagtcagtgcacagcactcacccctcctgctgtgcaagcgctatgcgac
tcatttcctgcacttcacacctgctcatggagacattccctagtcatgagtggctgtttg
aacttgacctctgtgcactgtgcctgtgccgtccaagcacaccgaacaatgagttctatt
cctaatccagctcattga

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