Manihot esculenta (cassava): 110609243
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Entry
110609243 CDS
T05761
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110609243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110609243
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110609243
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Motif
Other DBs
NCBI-GeneID:
110609243
NCBI-ProteinID:
XP_043809915
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Position
2:complement(4076170..4081140)
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AA seq
716 aa
AA seq
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MPSQPNFHFSLPRWIGLLCRRNRQIESNDSSGDSGSNNINVDDTAVSNSVECYACTQVGV
PAFHSTSCDHAHQPEWVASAGSSLVPIQNRPGPKKSPSSKAQPRVHRGPLKTILDPRSKR
VQKWNRAFLLARGMALAIDPLFFYALSIGRGGAPCLYMDGGLAAIVTVLRTCVDAVHLCH
LWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVLP
KLIREEHIKLIMTILLLIFLFQFLPKVYHCIYLMRKMQKVTGYIFGTIWWGFGLNLIAYF
IASHVAGGCWYVLAIQRAASCLRQQCQRRPNCDLSLSCSEEICYQFLASANTIGNPCGGN
FTTAVRKPMCLDIKGPFKYGIYKTALPVISSNSLAVKIFYPIFWGLMTLSTFGNDLEPTN
NWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRL
RQRVRNFERQRWAAMGGDDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDN
ICDRVRPLVYSKDEKIIREGDPVQRMVFIIRGRIKRSQSLSKGMVATSVLEPGGFLGDEL
LSWCLRRPFIDRLPASSATFVSIESTEAFGLDANHLRYITDHFRYKFANERLKRTARYYS
SNWRTWAAVNIQFAWRRYRKRTRGPVTPVVENGGSDRRLLQYAAMFMSIRPHDHLE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcagcccaacttccacttctctctcccaaggtggattggactgctttgccgc
cgaaatcgccagattgagagtaacgacagtagcggcgacagcggcagcaacaatatcaac
gtggatgacactgccgtctctaactccgtagaatgctacgcctgtacccaggttggtgtt
cctgccttccactccaccagctgcgaccacgcccaccagcccgaatgggtggcctctgcc
ggctcatctcttgtccctatccaaaaccggcctggccccaagaagagtccctcatctaaa
gcccaaccacgggtacacagaggccccttgaaaacaatcctcgaccctcgtagcaagcgc
gttcagaaatggaaccgcgcgtttcttctggctcgtggcatggctctagctattgatcca
ttgttcttctacgcgttgtcaattggaagaggtggtgctccgtgcctgtacatggacggt
ggattagccgctatagtgactgttctccgcacgtgtgtggatgcggtgcatttgtgccac
ttgtggttgcagttcaggctggcatacgtgtcgcgggaatcgctggtggttgggtgtggg
aaactggtatgggatgcacgtgccatcgcctcccactacgtgcggtccttgaaagggttc
tggttcgatgcgtttgtaatactgccagtcccacaggctgtgttctggttagttcttccc
aaattgataagagaagagcatattaagctgataatgacaatacttctacttatcttcttg
ttccaattcctccctaaagtgtaccactgcatttacttgatgagaaaaatgcagaaggtt
acaggttatatctttggcaccatttggtggggttttggccttaatctcattgcctacttc
attgcctctcatgttgctggaggatgctggtatgttcttgccattcaacgggcagcttcg
tgcctgaggcagcagtgtcaaagaagaccaaattgtgacctatctttgtcctgctcagag
gagatctgttatcagtttctggcatctgcaaacacaattggaaatccatgtggtggtaac
tttaccacggctgttagaaagccaatgtgcttggatattaaaggcccattcaaatatgga
atctataagactgctctacctgtcatttccagtaattctttggctgtcaagatcttttat
cccatattttggggtttaatgactctcagtacctttggcaatgatctggaacccacgaat
aattggctagaagtaattttcagtatatgcatagtccttagtggtttaatgctcttcact
ttgttgattgggaatatccaggtgttcctgcatgcggtcatggcaaagaagaggaaaatg
cagctgagatgcagagatatggaatggtggatgaggcggagacagttaccatctcgtttg
agacagagagttcgcaacttcgaaagacaaagatgggcagccatgggaggtgatgatgag
atggaattaatcaaagacttacctgaaggactccgacgagatatcaagcgctacctttgc
ctagacctcattaagaaggttcctctgttccacaacttggatgatcttattcttgacaac
atctgcgatcgggttaggccccttgtgtactctaaagatgaaaagataattagagaagga
gatcctgtgcaaaggatggtgttcatcattcgtgggcgtatcaagagaagccaaagcctc
agtaaaggcatggtagcaaccagcgtgcttgaaccaggagggtttctgggtgatgagctg
ctttcttggtgcctccgccgcccattcatagaccggcttccagcctcatctgctacattc
gttagtatagaatctacagaagcatttggacttgatgcaaaccatcttcgttacatcaca
gatcatttccgttacaagtttgctaacgaaaggcttaagcggactgcgagatattattcc
tcgaattggcgaacatgggcagcagtgaacatacaatttgcttggcggcgctacaggaag
aggactagaggtccggtgactcctgtagtagaaaatggaggctctgatcgtcggctactt
cagtatgctgcaatgttcatgtcaatcaggccacatgatcacctcgaataa
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