Manihot esculenta (cassava): 110609257
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Entry
110609257 CDS
T05761
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110609257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110609257
Spliceosome [BR:
mesc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
110609257
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110609257
NCBI-ProteinID:
XP_021604403
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Position
2:6563940..6569382
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AA seq
564 aa
AA seq
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MKTKREDNNVESEKRSPKRRRVVENHSSSASPSPQIIDNPLVPYNDMDDDEDDERMRRER
NNNNRAGEYGEGVAGNGYQGPDVEDKEEEEEDDDDGQGSNQENRRNLIEPREDCPYLDTV
NRQALDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLQTEK
VYCLPDGYQIIDPSLDDIRHVLNPRFTRDQVDQLDKNRQWSRALDGSDYLPGMVGLNNIK
ETDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHE
FLQAIMKASKKRFRIGQQSDPVEFMAWLLNTLHADLRNSKKNNSIIYECFQGELEVVKEI
PSKFIVDKKANGDDQNVDGGNEHDDVFTETSTMPFLMLGLDLPPPPLFKDVMEKNIIPQV
PLFNILKKFDGEMVTEVVRPRVARMKYRVTRLPQYLVLHMQRFKKNNFFIEKNPTLVNFP
VKNLELKDYIPLPMPKENEKLRSKYDLIANIVHDGKPKEGFYRVFVQRKSEELWYEMQDL
HVSETLPQMVALSEAYVQIYEQQK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaaagagaagataataatgtggagagtgagaaacgttccccaaagcggcga
agagtggttgaaaaccactcttcttctgcatctccttctccacaaatcattgataaccca
cttgtgccctacaatgacatggatgatgatgaagatgatgaaagaatgagaagagaacgg
aataacaataacagagcaggtgaatatggagaaggtgtagcagggaatggctatcaaggt
ccagatgtagaagacaaagaagaagaagaagaagatgatgatgatggacaagggtccaat
caagagaaccggaggaatctaattgagcctcgtgaagactgcccttatcttgatactgtg
aatcgtcaggcgttggattttgatttcgagaaattttgttctgtctctttgtcaaacctg
aatgtatatgcatgtttggtttgtgggaaatattaccaagggagagggaagaaatcccat
gcatatactcatagccttgaagcaggacaccatgtctatattaatcttcagactgagaaa
gtttactgccttcctgatggatatcaaattattgacccatcgctggatgacattcggcat
gttctgaacccgaggtttactagggatcaggttgatcaacttgacaaaaacagacaatgg
tccagggcacttgatgggtctgattatcttcctggaatggtgggcctgaataacattaaa
gagactgattttgttaatgtcactattcagtctctaatgagagttacacctttaagaaat
ttcttccttatccctgaaaactatcagcattgcagatctcctcttgttcatcgctttgga
gaactcacaagaaagatatggcatgctaggaactttaaaggacaggtgagcccgcatgaa
tttctccaagcaattatgaaagccagtaaaaaacgatttcggataggacagcagtctgat
cctgtggagttcatggcatggcttcttaatacactacatgcagatcttagaaattcaaag
aaaaataacagcattatttatgagtgctttcagggggagctggaagttgtaaaagagatt
cctagcaaatttattgttgataagaaggcaaatggcgatgaccagaatgttgatggtggg
aatgaacatgatgatgttttcacagaaacttctacaatgccattcttgatgcttggactg
gatttgccaccaccacctctatttaaagatgtgatggaaaagaatataataccccaggtt
cctctgttcaatatactgaagaaatttgatggtgaaatggtgactgaagttgtccgccct
cgtgttgcccggatgaaatatcgagtcactagattgccacagtatttagtactccacatg
caacggttcaaaaagaacaacttttttattgagaaaaatccaaccttagtcaactttcct
gtgaagaacttggaactgaaggattatataccattgccaatgccgaaagagaatgagaag
ttgcgatctaagtatgatttgatagccaatattgttcatgatggaaaacccaaggaggga
ttctacagagtgtttgtgcagcggaaatcagaggagctatggtatgagatgcaggatctg
catgtttctgaaactcttccacaaatggttgcgctatctgaggcatatgtgcagatatat
gagcagcagaagtag
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