Manihot esculenta (cassava): 110609280
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Entry
110609280 CDS
T05761
Name
(RefSeq) protein argonaute 1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110609280
03036 Chromosome and associated proteins [BR:
mesc03036
]
110609280
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110609280
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110609280
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
110609280
microRNA pathway
RISC loading complex
110609280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
110609280
NCBI-ProteinID:
XP_021604436
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All DBs
Position
2:complement(34902409..34940318)
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AA seq
1070 aa
AA seq
DB search
MVRKRRTELPPSGGESSESHEAAGGSGRGFQRPSERSAPPQQGAGGAYQGGRWGPQSQQG
GRGGGYGGGRGRGGMPQQQQYGAPPEHQGRGRGGPPQQGGRGGYGGGRSGGGGRGGGSPS
GGPSRPPVPELHQATLAPYPAGVSPQPMSSEGSSSFRPPEPIPAVIQQQMQELSIQQEME
SQAIQASPPPSSKSMRFPLRPGKGSTGIKCIVKANHFFAELPDKDLHQYDVTITPEVTSR
GVNRAVMEQLVKLYKESHLGKRLPAYDGRKSLYTAGPLPFISKEFKITLIDEDDGSGGQR
REREFRVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTTRYCPVGRSFYS
PDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVNQLLNRDVS
SRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDDRGTVKSVV
EYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTC
QRPHERELDIMQTVHHNAYHNDPYAKEFGIKISEKLASVEARILPPPRLKYHDTGRERDC
LPQVGQWNMMNKKMVNGGTVNNWICVNFSRNVQDSVARGFCYELAQMCHISGMAFNPEPV
LPPISGRPEQVEKVLKTRYHDAMTKLQPQGKELDLLIVILPDNNGSLYGDLKRICETDLG
LVSQCCLTKHVFRMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADV
THPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWQDPVRGKATGG
MIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRRACASLEPNYQPPVTF
VVVQKRHHTRLFANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP
AHYHVLWDENKFTADYLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARCYMEPETS
DSGSMTSGPVSGRGGMGGGAGARSTRGPASAAVRPLPALKENVKRVMFYC
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagaggagaactgagcttcctccaagtgggggtgagagctccgagtctcat
gaagctgctgggggtagtggtcgtggtttccagcgaccatctgagaggagcgctccacct
cagcagggagcaggtggagcataccaaggtggaaggtggggtccccagtctcagcaagga
ggacgtggtggtggttatggtgggggccgtggccgtggtgggatgccccaacagcagcag
tatggtgccccccctgaacatcaaggaaggggaagaggagggcctcctcagcaaggaggc
cggggaggctatggtggtggtcgtagcggtggtggtggccgtggaggaggttctccttct
ggtggcccatctagaccaccagttcccgagctgcaccaagcaaccctggctccatatcca
gctggggtgtcccctcagcccatgtcttctgaggggagctcttcattccgtcctccagag
ccaataccagcagtaatacaacagcagatgcaggagctttctatccagcaagaaatggaa
agtcaggcaattcaggcttcacctccaccctcaagtaaatcaatgaggttccccctcagg
ccggggaagggtagcactggcataaagtgtatagtaaaggctaaccacttctttgctgaa
ttaccagataaagatttgcaccagtatgatgttaccatcacaccagaggtcacatcacga
ggtgtaaaccgcgccgtaatggaacaacttgttaaactgtacaaagaatctcaccttgga
aagcgtcttcctgcctatgatggccgaaagagtctatacactgctgggccacttccattt
atctcaaaggaatttaagatcactctcattgatgaagatgatggatcaggcgggcaaagg
agggagagggagttcagagttgtaatcaaattagctgcacgggctgacctacaccattta
gggctctttttgcagggaaggcaagcagatgcaccacaggaagctcttcaagttcttgac
attgttttgcgtgaattacctaccactcggtactgccctgtgggtcgatcattttattcc
cctgatctaggaagaaggcaaccccttggtgagggtttagaaagttggcgtggtttttac
caaagcattcgccctacacaaatgggactgtcacttaatattgatatgtcttctactgct
ttcattgagccactgccagtaattgactttgtaaaccaactattgaatcgagatgtgtcc
tctagacctttgtctgatgctgaccgtgtgaagataaaaaaagctcttagaggagtcaag
gttgaagttacacaccgaggaaatatgcgtaggaagtaccgtatatctggtttaacatcg
caggcgactcgagaattgacttttccggttgatgacagaggaactgtgaagtctgtggta
gaatacttctacgagacatatggatttgtaattcaacacactcaatggccctgcttacaa
gtgggaaatcagcagaggcctaattatttgccaatggaagtatgcaagattgtggagggt
cagaggtattccaagagactgaatgagaggcagataactgctttgctaaaggtgacctgt
cagcgtcctcatgaaagggagcttgatatcatgcagactgttcatcataatgcttatcac
aatgatccttatgcaaaggagtttggaattaaaattagtgagaagcttgcttcagttgaa
gctcgcattttgccacctccaaggcttaaatatcatgacactggtagagagagggattgc
ctgcctcaagttggacagtggaacatgatgaataagaaaatggttaatggaggaacagtg
aacaattggatatgtgtaaatttttctcggaatgttcaagacagtgtagcccgtggattt
tgttatgaacttgcgcaaatgtgtcacatatcaggcatggcttttaatcctgagccggta
cttcctccaatcagtggtcgtccagagcaggtagagaaggtcttgaaaactcgttatcat
gatgccatgacaaaacttcagccccagggcaaggaacttgacctgcttattgtaattctc
cctgataataatggttccctttatggtgatttgaaacggatatgtgagacagatcttggc
cttgtttctcagtgttgtttaacaaagcatgtattcagaatgagtaagcagtatttggcc
aatgtggctttgaagataaatgtgaaggttggaggaagaaatactgtacttgttgatgca
atatcaaggcgcattcctttagtcagcgaccggcccactattatttttggtgctgatgtt
acccatcctcatcctggggaagactcaagcccatctattgcagctgttgtggcttctcag
gattggcctgagattacaaagtatgctggtttggtttgtgctcaagcccatcgacaagag
cttatccaagatctgttcaaagaatggcaggatcctgtaagagggaaagccactggtgga
atgatcaaggaactccttatatctttccgcagagcaactggacagaagccacagcgtatc
atattttacagagatggtgtcagtgaagggcaattctatcaagttttgctgtatgaactt
gatgctattcggagggcatgtgcttctttagaaccaaattatcagcctcctgtaactttt
gtagtggttcagaagcgccaccatacccggttgtttgccaatgaccaccgtgaccgtaat
gctgttgacaggagtgggaacatactgcctggtactgtggtggactctaagatctgtcat
ccaactgagtttgacttttatttgtgtagccatgctggcattcagggcacgagccgtcct
gctcattaccatgtactatgggatgagaacaagtttactgctgattacttgcagtccctt
acaaacaatctctgctacacatacgcgagatgcacacgttctgtttccattgtgcctcct
gcatactatgcacatcttgctgcatttcgagctcgatgctatatggagccagagacatca
gacagtggttcaatgacaagtggtcctgtatctggacgtggaggcatgggtggaggtgca
ggtgcgcggagcacacgaggacctgcttctgccgctgtgcgccccttacctgctttgaag
gagaatgtgaagcgggtgatgttttactgctag
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