KEGG   Manihot esculenta (cassava): 110609365
Entry
110609365         CDS       T05761                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03083  Polycomb repressive complex
mesc04120  Ubiquitin mediated proteolysis
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110609365
   04120 Ubiquitin mediated proteolysis
    110609365
  09126 Chromosome
   03083 Polycomb repressive complex
    110609365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110609365
   04121 Ubiquitin system [BR:mesc04121]
    110609365
   03036 Chromosome and associated proteins [BR:mesc03036]
    110609365
Membrane trafficking [BR:mesc04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    110609365
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     110609365
   Cul7 complex
     110609365
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     110609365
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     110609365
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 110609365
NCBI-ProteinID: XP_021604992
LinkDB
Position
1:33875054..33876945
AA seq 156 aa
MSSKKIILKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCK
RHVETPKSDDRNNSVDDDLKTWDAEFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADM
IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcgtccaagaagatcatcttgaagagcagcgacggtgagtccttcgaggtggacgag
gcggtggcgcttgagtctcagactatcaaacatatgatcgaggacgattgcgccgataac
ggtatcccgctgccgaatgtgacgagcaagatcctggctaaggtgatcgagtactgcaaa
aggcacgtggagactcccaagtctgatgatcgcaacaacagtgtagatgacgatctcaag
acctgggatgctgaattcgtgaaagtcgatcaggccacactcttcgatctcattctggct
gccaactatttgaacattaagggcctgctggacttgacatgccagactgttgcagacatg
atcaagggaaagactcctgaggagatccggaagacattcaacatcaagaatgacttcacc
cctgaggaagaggaagaggttcgtagggagaaccagtgggcgtttgaatga

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