Manihot esculenta (cassava): 110609441
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Entry
110609441 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609441
04121 Ubiquitin system [BR:
mesc04121
]
110609441
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110609441
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110609441
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110609441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-Nse
zf-RING_16
Anti-TRAP
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110609441
NCBI-ProteinID:
XP_021604703
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All DBs
Position
2:12680540..12682849
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AA seq
388 aa
AA seq
DB search
MFIYISSFWFLLPKSPKSQGASFLRTTINPESRNHRKPTPQVTMSLSPPRTRTDNTTTRT
FQPYWCYRCHRMVRIAPSDPSEIICPRCSGQFLCEVEMNRPRLVDDFTAFDPSPEARLLE
ALSLMLDPPIRRLNFGLHDDLESESRGRSWFRRRNRWDPDGEIRPRRRRHLSLDGRENWE
DEPGLQFRPRTWIVLRPYDPFAPTIPGLRPETPMPPRVNPREYFFGPGLNDLIEQLTQDD
RPGPPPVPESVIDAIPTVKVTASHLVNDSNCPVCKEEFKIGGEAKELPCKHIYHKDCIVP
WLRLHNSCPVCRKELPILPENSSHASDGQRECEHEEDVNGRCLRWRRQLANLWPFRPRYG
RISPHGEHDGASQGGQSWFRRLFQHFTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttcatatatatatcttcattttggtttcttcttcccaaatctcccaaatcccaaggc
gcatccttcttgagaacaaccataaacccagaaagcagaaaccacaggaaaccaacccca
caagtaaccatgtctttgagcccaccgaggacgcgaaccgataatacaaccacaagaacc
ttccagccgtactggtgctaccggtgccatcgaatggtcaggattgccccctcagaccca
tcagaaatcatatgtcctagatgttccgggcagttcctttgcgaggttgagatgaataga
ccgagattagttgatgatttcactgcttttgatccctcgcctgaagctcgcttacttgaa
gcgctttctctcatgcttgaccctcctattagaaggttaaattttggtcttcatgatgat
ctggaatcagaatctcgtggaaggtcctggtttcgaagacgaaatcgatgggaccctgat
ggtgaaatccgtccccggaggcgtcgacatcttagtttagatgggagagagaactgggaa
gatgaaccaggactccagtttagaccaagaacatggatcgtccttagaccatatgatcct
tttgctccaactataccaggtttgcgacctgaaactccgatgcctcccagggttaatccc
agggagtactttttcggcccaggcctaaacgatttgatcgaacaactgactcaagatgac
cgtccagggccaccaccggtacccgaatcagttattgacgcaataccaacggtgaaggtc
accgcaagtcatttggtgaatgactctaattgtccagtttgcaaggaagagttcaagatt
ggaggggaggcaaaggaactgccttgcaagcacatatatcataaagattgtattgtgcct
tggttaaggttgcacaactcttgcccagtctgtcgaaaagagttgccgattcttcctgaa
aatagcagtcatgcatctgatggtcaacgtgagtgcgagcatgaagaggacgtgaatgga
aggtgcctaaggtggagaagacaactagcaaacttgtggccatttcgtccgagatatgga
agaatcagtcctcatggagagcatgacggtgcttctcagggaggacaaagctggtttcgt
aggttatttcagcattttactcattga
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