Manihot esculenta (cassava): 110609460
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Entry
110609460 CDS
T05761
Name
(RefSeq) vacuolar protein sorting-associated protein 9A isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609460
Membrane trafficking [BR:
mesc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110609460
Protein recycling
Other Rab GTPase associated proteins
110609460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
110609460
NCBI-ProteinID:
XP_021604731
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All DBs
Position
2:12381433..12387738
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AA seq
483 aa
AA seq
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MENADVFLGLHDFLERMRQPTAADFVKSIKSFIVSFSNNAPDPDKDSALVQEFLANMEAA
FRAHPLWAGCSDEELESAGEGLEKYVMTKLFTRVFASLPDDVKVDEQLSEKMSLIQQFIR
PENLDIKPTFQNETSWLLAQKELQKINIYKAPRDKLVCILNCCKVINNLLLNASIASNEN
PPGADEFLPVLIFVAIKANPPQLHSNLLYIQRYRRQSRLVAEAAYFFTNMLSAESFISNI
NAESLSMEENEFEKNMESARALLSGLSTDLDSLSNQSDQNVGNNLKAEVMDSKLQALTST
KERDSSIRSSPSETRSGSKDVQHVKDESSVARVQSLSDIENRGALMLLKEDLASKVFQEY
PYLFAHTGDLTINDVEDLLDNYKKLVFKYVCLSKGLGGAIPSLNLSTCHHSEAETVKEHQ
DTGAVELNDESQKHTTVMDSSFTDSLVSEENIKSISEENIKSKSQLDETIASQEEGKEEN
SQG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgctgacgttttcctaggtttgcatgacttcttagagcgcatgcgccaacca
accgccgctgatttcgtcaaatccattaagagcttcattgtctctttctcaaacaatgct
cctgatccagacaaggacagtgctctggtacaggagtttcttgccaacatggaagcagct
ttcagggctcatccactctgggctggttgctcagatgaggagctggagagtgctggtgaa
ggactcgagaagtatgtaatgacaaagttatttactcgtgtgtttgcttcacttcctgat
gatgttaaagttgatgagcaactttctgagaagatgtctttgattcaacaattcattagg
ccagaaaatttagacattaagccaacctttcaaaatgaaacatcatggctgcttgcccag
aaagaactgcaaaagatcaatatatacaaagcaccgagagacaaacttgtgtgcattctc
aattgttgcaaggtcataaataacttactgcttaatgcttcaattgcttccaatgagaat
cctcctggggctgatgaatttcttcctgtactaatatttgttgctataaaggcaaaccct
ccgcagctgcactcaaatttactgtatatacaacggtataggcgtcaatcccggttagtt
gcggaagcagcatattttttcacaaatatgctctccgcggagtctttcatatcaaacatt
aatgcagaatccctttcaatggaggaaaatgaatttgaaaagaacatggaatctgctcga
gctcttctatctgggctttcaactgatttggatagtctgtctaatcaaagtgatcaaaat
gttggaaataatcttaaagcagaagttatggattccaaacttcaagctttaacttctacc
aaggaaagggactcctccatcagatccagcccttctgaaacaagatctggcagcaaggac
gtacaacatgtgaaagatgagtcatctgtggcaagggttcaatccctctcagatatagag
aacagaggagcactgatgcttttaaaggaggacctggcaagtaaagtctttcaagaatac
ccatacttgtttgctcatactggtgatctgacaatcaatgatgtagaagacctactagat
aattacaaaaagctggttttcaagtatgtttgtctttccaaaggactgggtggtgctatc
ccgtcgcttaatctgtccacttgtcatcactctgaagctgaaactgtcaaagaacatcag
gacactggagcagtagagctaaatgatgaatcacaaaaacatactactgtgatggatagt
tcgttcacagattctcttgtcagtgaagaaaatatcaaatcaatcagtgaagaaaatatc
aaatcaaagtcccaacttgatgagacaatagcatctcaagaggagggaaaggaggaaaat
tctcaaggatag
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