KEGG   Manihot esculenta (cassava): 110609466
Entry
110609466         CDS       T05761                                 
Name
(RefSeq) SKP1-like protein 1B isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03083  Polycomb repressive complex
mesc04120  Ubiquitin mediated proteolysis
mesc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110609466
   04120 Ubiquitin mediated proteolysis
    110609466
  09126 Chromosome
   03083 Polycomb repressive complex
    110609466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mesc04131]
    110609466
   04121 Ubiquitin system [BR:mesc04121]
    110609466
   03036 Chromosome and associated proteins [BR:mesc03036]
    110609466
Membrane trafficking [BR:mesc04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    110609466
Ubiquitin system [BR:mesc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     110609466
   Cul7 complex
     110609466
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     110609466
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     110609466
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 110609466
NCBI-ProteinID: XP_021604740
LinkDB
Position
2:8445614..8449949
AA seq 153 aa
MSSSKKITLKSSDGELFEVDEAVALESHIIKHAIEDVGADDSIPLPNVTSKILAKVIEYC
KKHVETPKPDANHELNTWDAEFVKVDQATLFDLILAANYLNIKGLVDLTCQTVADMIKDD
LTPEEIRKTFNMMNDLTPEEVEEVCRAHPWAFE
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtcgtcatcgaagaaaatcaccttgaagagcagcgacggtgagctcttcgaggtggac
gaggcggtggcgctcgaatctcacataatcaaacatgcgatcgaggacgttggcgctgat
gacagtatcccgctgccaaatgtgacgagcaagatcctggcgaaagtgatcgagtactgc
aagaagcacgtcgagactcccaagcccgacgccaatcatgagctgaacacctgggacgct
gagtttgtgaaagttgatcaggccacgctcttcgatctcattctggcagccaactatttg
aacatcaagggcctggtggacctgacatgccagactgttgcagacatgatcaaggatgat
ttgacccctgaggagatccggaagacgtttaacatgatgaatgatttgacccctgaggaa
gtggaagaggtttgtcgggcgcacccgtgggcatttgaatga

DBGET integrated database retrieval system