Manihot esculenta (cassava): 110609505
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Entry
110609505 CDS
T05761
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1
KO
K27807
short internodes/stylish family transcription factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110609505
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110609505
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
110609505
NCBI-ProteinID:
XP_021604795
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Position
2:10782989..10785579
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AA seq
351 aa
AA seq
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MGMFVVTPASFNHHHQHQHESSINLATDPIHGSNAAATALGVGVGVGVIPLLTAAPCLAP
QNMDDQDLLNNGRNKMGGLQFWQNQSSHHHTLSNIKRTNASILDHDNSPANLLQSGNNNS
SGGGIGGNSASSGTTTCQDCGNQAKKDCSYRRCRTCCKSRGYDCSTHVKSTWVPAARRRE
RQLMAAAAGGGDGSSGSTTGIKKPRLVNSQTTTNSHTSTSNTTPPRSFDTSSSHQDASFK
ETLPGNVRAQAVFKCVRVTAVDDGEDEYAYQAVVNIGGHVFKGFLYDQGVEGRDGFPNIS
ELHLGSANSGGGGGDGVRNGASSSPIIDPSDVYGASGGGLLGGLSYGNPIN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgtttgttgttactcctgcttcctttaatcaccaccaccagcatcagcatgag
tcgtctatcaatcttgccactgatccaatccatggctcaaacgctgctgctactgcgctc
ggtgtcggtgtgggtgtaggcgttatcccacttctcacggccgctccatgtctagcgccg
caaaacatggatgatcaagatttgctgaataatgggcgcaacaaaatgggtggcctccag
ttttggcaaaaccaatcttctcatcaccacaccctgtccaatataaagagaactaatgct
tcgattctcgatcacgataattctccagcgaatctgcttcagagcggtaacaataacagc
tccggtggtggtattggtggtaattcagcttcatctgggacaacaacgtgccaagattgc
ggaaaccaagccaagaaagattgcagctatagaaggtgcaggacctgctgcaaaagtcgt
ggttatgattgctctactcacgtcaagagcacgtgggtaccggcggccaggaggagagag
cgtcagctaatggcagctgcagccggaggaggtgatggttcttctgggtctactactggg
atcaagaaacctagactcgtaaactcacaaaccaccaccaattctcatacatccacttct
aacactaccccaccaagaagctttgatactagctccagtcaccaagatgcgagttttaag
gagacattgccggggaatgtacgtgcacaggcggttttcaagtgtgttagagtgacggca
gtggacgacggtgaagatgagtatgcgtatcaggctgtggtaaatattggtggccatgtc
ttcaaagggtttctatatgatcaaggagttgaaggaagagatgggttccctaatatatca
gaattgcatttgggtagtgctaacagtggcggcggcggcggtgacggagtaaggaacgga
gcctcatcttccccgattattgatccttcagatgtttatggtgcatccggtggagggttg
ctgggtggtttaagctatggtaatccaataaactga
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