Manihot esculenta (cassava): 110609568
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Entry
110609568 CDS
T05761
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04144
Endocytosis
mesc04517
IgSF CAM signaling
mesc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110609568
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110609568
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110609568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609568
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mesc04812
]
110609568
Membrane trafficking [BR:
mesc04131
]
Others
Actin-binding proteins
Arp2/3 complex
110609568
Cytoskeleton proteins [BR:
mesc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
110609568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_Aladin
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Tricorn_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_WDR36-Utp21_2nd
Ge1_WD40
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
BNR_3
Beta-prop_TEP1_C
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
110609568
NCBI-ProteinID:
XP_021604923
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All DBs
Position
2:6890159..6898550
Genome browser
AA seq
378 aa
AA seq
DB search
MAVVAVHQLAQCITCHAWSPDHTMIALCPNNNEVHIYKSSQDKWDRVHVLQKHDQIVSGI
DWSVRSNRIVTASHDRNSYVWNKEGPEWVPTLVILRLNRAALCVQWSPRENKFAVGSGAK
TVCICYYEQDNNWWVSKVLRKRHDSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
KDSKASSSSDSKFGEQIVQLDLSFSWAFGVKWSPSGKTLAYVGHNSMIYFVDDVGPSPLS
QNVAFRDLPLRDVLFFSEKMVIGVGFDCNPMVFGADEKGIWSFVRCLNEKISSFSGSKYG
SQLSEAFGKFNGQSEIGVSNDGIDSSTSQGVIHENCINCVASLGKAGSSRTLRFSTSGLD
GRVVIWDLENQEDLSRFL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcgcggttcaccagttggcccagtgcataacttgccacgcttggagtccc
gatcacactatgattgcactttgtcccaataataatgaagttcacatttataaatcctcc
caagacaaatgggacagggtacatgtcctccaaaagcatgatcaaattgtctctgggata
gattggagtgtgagatcaaacagaattgttactgcatctcatgatcgaaattcatatgta
tggaacaaagaaggaccagaatgggtaccaacccttgttattctcaggcttaaccgtgct
gcactttgtgtgcagtggagtccaagagagaataagtttgctgttggaagtggggctaaa
actgtatgtatatgctactatgagcaagacaataactggtgggtcagtaaagttttaagg
aagagacatgattcctctgtgacaagtgttgcttggcaccccaataatattcttcttgca
acaacatctactgatggaaaatgtcgagttttttccacctttataaaaggtgttgataca
aaggactcaaaagcaagctcttcttcagactccaaatttggagagcaaattgtccagctt
gatctgtcattttcctgggcatttggtgttaagtggtcaccaagtggcaaaacattagct
tatgtaggtcataattctatgatttactttgttgatgatgttggtccttctccactgtcc
caaaatgtggcatttcgcgatttacctctccgtgatgtcctatttttttctgagaaaatg
gtcataggtgtgggatttgattgtaacccaatggtttttggagctgatgaaaaaggaata
tggagctttgtccggtgcctcaatgaaaagatatcgtcattttcaggttcaaagtatggt
tcacagttatctgaggcgttcggaaaatttaatggccaatcagagattggtgtgagcaat
gatggcattgattcttcaacatcgcagggagtcattcatgagaactgcataaattgtgtt
gcgtctcttgggaaagcggggagttctagaacactgcgcttcagcacttcaggattggat
gggagagtggttatttgggatctggagaaccaggaagatctctcccgatttctgtga
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