Manihot esculenta (cassava): 110609586
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Entry
110609586 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609586
04121 Ubiquitin system [BR:
mesc04121
]
110609586
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110609586
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110609586
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110609586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-C3HC4_3
Prok-RING_4
Zn_ribbon_FGT1_2
Zn_ribbon_8
zf-RING_16
FAR1_N
Motif
Other DBs
NCBI-GeneID:
110609586
NCBI-ProteinID:
XP_021604963
LinkDB
All DBs
Position
2:9877774..9879549
Genome browser
AA seq
382 aa
AA seq
DB search
MSTSTSYWCYRCTRFVTVLLSPDNNDVTCPHCHGGFIEEIEANSQSDNPHRRFMYMLSDN
NGSNRQDSDRVPTLRFRRNRRNAGDRSPFNPVIVLRGTASEENEEGSSYEFYYDDGTGSG
LRPVPASMSEFFMGSGFDRLLDQLAQIEVNGFGRVGNPPASKAVVESMPTVEINQTHVLA
EAHCAVCKEAFELGGEAREMPCAHIYHSDCILPWLAVRNSCPVCRHELPADQQESENSGE
SDEIVGLTIWRLPGGGFAVGRFSGGRRGGEREFPGVFTEMDGGFSGSGGAPRRVSWVSRT
SRRRESSGGGGFRRVFRGLVSFLRRIRSNSSSSSTTSSSLHPDPESGSISRSSSHSSSGF
GRYVSRRRRGLDLEVENGTERW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgacgtcttattggtgttatagatgcacgcgcttcgtcaccgtcttgctc
tctccggataacaacgatgtcacttgtcctcactgccatggtggatttattgaagagatc
gaagctaattcccaatcggacaatccacaccgtcgattcatgtatatgttatcggataac
aacggtagtaaccgtcaggactcagatcgggttcccaccttaagatttcgcaggaatcga
cgaaacgcaggcgatcgttccccgtttaacccggttattgtcttgcgtggaaccgcctcc
gaagagaacgaggaaggaagcagctacgagttttactacgacgacggaaccgggtcgggt
cttagaccagtgccggcaagtatgtccgaattttttatgggatctggatttgaccgtttg
ctagaccagttagcacagattgaagtgaatggttttgggcgggtaggaaacccgccggct
tcgaaagcggtggtggagtcgatgcccacggttgaaataaatcaaacccacgtactagcg
gaggcacactgtgcagtgtgtaaggaggcgttcgaacttggtggtgaagcacgggagatg
ccgtgtgcacatatttaccactcggattgcatactcccttggctagcagtgaggaattcg
tgccccgtttgccgccacgagttgccggcggatcagcaagaaagcgagaattcgggggaa
tcggatgaaattgttgggctgaccatctggaggctgccaggaggtggatttgcagtggga
agatttagcgggggaaggaggggaggcgagagagagtttccgggcgtgtttacagagatg
gatggtgggtttagtggaagtggtggcgctcctaggagggtttcgtgggtgagtagaaca
agtaggaggagggagagcagtggtggtggtgggtttaggagggttttccgtgggttggtt
tcgtttttgaggaggattaggtctaattcttcttcctcttctactacatcttcgagtttg
catcctgatcctgaatctggttccatcagtagaagttctagtcactcgagttctgggttt
ggtcgatatgtaagcagacgcagaagaggcttggatttggaagttgagaatgggaccgaa
aggtggtga
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integrated database retrieval system
