Manihot esculenta (cassava): 110609712
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Entry
110609712 CDS
T05761
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110609712
Membrane trafficking [BR:
mesc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110609712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
110609712
NCBI-ProteinID:
XP_021605178
LinkDB
All DBs
Position
2:complement(3269259..3277637)
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AA seq
1417 aa
AA seq
DB search
MASNPPFHVMEDQTDEDFFDKLVDDDFGPTNSNLVPKLTEGSDSDEAKAFANLSIEDATG
EGRDEGKDESDLVHASAGLSSVLAEESDTLDSSLALVSNTKVDSNNDWIESEVVSDPLIG
ETSGSTKSGVKEVGWGSFYADSVPNGNHEFGAYSDFFNDLGNTAGDFPEQAGEAANLEKK
DGDRLHSSVSSYGEYQEGTQGYGGSIEESVNEQDLNSSQYWENMYPGWKFDANTGQWYQV
DNFDVTASVQGSSNVNTGNEWAAVSDGKIQMNYLQQTSHSVLGTVAEASSSESVSTWNQV
SQGINNGYPEHMFFDPQYPGWYYDTIVQEWRSLESYTSSVQSATVQNHDHQATVQNHHQQ
KQNEFACADLGSQNTNSIYAGYEQVDKHDSQGHNSQDKHRSWGESYGDYNQQGLNMWQPD
AVAKTDTVSDFGRNQQLLNSYDSNVSMNNHVEQHKPFNSLGSVLSYDNLSQGRVDSNGFI
GSQNFMPSESFGQQFNQGTVEQSKPMNISNDHYSSQKPINFSQKSFHNLQQLSYAPNAGM
SSAGRPPHALVTFGFGGKLIVMKDSSSSSLTNASFASQEPVGGSIYVLNLMEVILGNDNN
ALNIRGSTCNYFHALCQQSFPGPLLGGNVGSKELNKWIDDRIANCESPDMDYRNGKVLKL
LLSLLKIACQHYGKFRSPFGTDVSLKESEAPESAVAKLFASAKRNGTEFSDYGALSRCLQ
SLPSEGQIQATASEVQNLLVSGRKKEALQCAQIGQLWGPALVLASQLGDQFYVDTVKQMA
LRQLVAGSPLRTLCLLIAGQPADVFSSDATTGSGLPGAISQQPIQFEANGMLDDWEENLA
VITANRTKDDELVIIHLGDCLLKERSEITGAHICYLVAEANFESYSDSARLCLIAADHWK
HPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKISDSLKYCQAI
LKSLKVGRAPEVETWKQLILSLEERIRTHQQGGYTANLAPAKLVGKLLNFFDSTAHRVVG
GLPPPVPSTSPGSMQGTDRHHQPTVPRVSASQSTMAMSSLMPSASMEPISEWAADGNRMT
MHNRSASEPDIGRTPRQVESPKGTSSNAQGKTSGSGTASRFGRFGFGSQLLQRTVGLVLR
PRSDRQAKLGETNKFYYDEKLKRWVEEGAEPPAEEAALPPPPTTSAFQNGVSDYNLKSAL
KSDGSPTNGSPTSKTPNPVEHASGIPPIPTSSNQFSARGRMGVRARYVDTFNQGGRSSAK
LFQSPSVPSVKPAVSANAKFFVPTPLPSSGNSTENVAENVQESAGFAEYPSTSIDDSLQS
SSLSSKMNMQRAPSMDNIPRRERTINDNIPMSSHARRTASWSGSFSDSFSPPKMVENKPL
GEAAGMPPSSFIPGDPSITQMPMNGGGIGDDLHEVAL
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaatcctccatttcacgtgatggaggatcagacggatgaggatttctttgat
aaattagttgacgatgattttggacctaccaactccaatttggtccctaagttaacggag
ggcagcgattccgatgaggccaaagcgtttgccaatctgagtattgaggatgcaaccggt
gaagggagagatgaggggaaagatgagagtgatttggtgcatgccagtgcaggattatcc
agtgtacttgcagaagaaagtgatacattggattcatctctcgcattggtgtccaatact
aaagttgattcaaataatgactggattgaatcagaggttgtatcagatccattaataggt
gaaacaagcgggtccacaaagtcaggggttaaggaggtgggatggggttcattttatgct
gattctgtacctaatgggaatcatgaatttggtgcctattcagatttttttaatgatttg
ggaaacactgcaggggattttcctgagcaagctggtgaagctgctaatttagagaaaaag
gatggtgacagactgcatagctcagtcagcagttatggggaatatcaagagggcacacaa
ggttatggaggatccattgaggagagtgtaaatgagcaggatttgaatagcagtcagtat
tgggagaacatgtatcccggttggaaatttgatgccaacacaggtcaatggtatcaagtg
gataattttgatgtaacagccagtgtccaagggagttctaatgttaacacagggaatgaa
tgggcggcagtttctgatgggaaaatacagatgaattatttgcagcagacttcacattct
gtgctgggaaccgtggctgaggctagctcatctgagagtgtgtctacttggaatcaggta
tctcaggggattaataatggttatccagaacatatgttttttgatccacaatatcctggt
tggtattatgacacaatagtgcaagagtggcgctccctggaaagctacacatcgtctgtt
caatcagcaactgttcagaatcatgatcaccaggcaactgttcaaaatcaccatcagcag
aaacaaaatgaatttgcttgtgctgatttgggttctcagaacaccaacagtatttatgct
ggatatgagcaagttgacaagcatgactcacaaggccataatagccaagacaagcatcgt
agctggggtgagtcttatggtgactacaatcagcaaggtttgaatatgtggcaacctgac
gcagttgctaagactgatactgtttcagattttggtagaaaccagcaattgcttaattcg
tatgattcaaatgtgtccatgaacaatcatgtggagcagcataaaccttttaattctctg
ggatcagttctttcatatgacaatctgagtcagggtcgtgtggattctaatgggttcatt
gggtcccaaaattttatgcctagtgagagcttcggtcagcagtttaatcagggaactgtg
gagcagagcaaaccaatgaacatttcaaatgatcactatagcagccagaaaccaataaat
ttttcccagaaatcatttcataacctccagcagctgtcttatgctcccaatgctgggatg
tcatctgctgggcgtcctccgcatgctttggttacatttggatttggtggaaagctcata
gtaatgaaagatagtagttcaagttctttgacgaatgcttcatttgcaagtcaggaacct
gtaggaggctcaatatatgttttgaatttgatggaggttatcttgggaaatgacaacaat
gctctaaatattagggggagcacttgcaattatttccatgctctctgccaacaatccttt
ccaggtccactgttgggaggcaatgttggaagtaaagagttgaataagtggattgatgat
agaattgctaattgtgaatcacctgacatggattatagaaatggcaaagtactgaagttg
cttctctctttgcttaaaattgcttgtcaacattatggaaaatttcgatctccttttggc
actgatgtttctttgaaggagagtgaagctccagagtcagcagttgcaaaactttttgca
tctgccaagagaaatggcacagaattcagtgattatggtgctttaagccgctgcttgcag
agtttgccgtctgaaggacaaattcaggctactgcctctgaggtacaaaatcttctggtt
tctggtagaaaaaaagaggctttgcagtgtgcacaaataggccagttgtggggacctgcg
cttgttctcgcatcacagcttggtgatcagttctatgtcgatactgtgaaacaaatggca
cttcggcagctggtagcaggatcacctttgcggacattatgcctgctaattgcagggcaa
ccggctgatgtattttccagtgacgctacaactggtagtggtcttcctggtgctatatct
caacagcctatccagtttgaagcaaatggaatgcttgatgattgggaagaaaatttggct
gtaataactgctaacagaactaaagatgatgagcttgtgattatacaccttggagattgc
ctattgaaggaaagaagtgagattacgggtgcacacatctgctacttggtggcggaggcc
aactttgaatcatattcagacagtgcaagactgtgtcttattgcagcagatcactggaag
catcctcggacttatgctagtccagaagctattcagagaactgaattgtatgaatactca
aaggtgcttggcaactcccagtttatcttgctgccatttcagccatataagctgatatat
gcatatatgctggctgaagtgggcaaaatttctgattcactaaagtactgtcaggcaata
ctaaaatctctaaaagttggtcgtgctccggaagtagaaacatggaaacaattaatatta
tcccttgaggagaggattagaactcatcaacagggtggatacacggcaaatttggctcca
gcaaagttagttggtaaattgctgaatttctttgatagtactgcacaccgtgttgttggt
ggtctaccaccacctgtaccatcaacatcaccaggaagcatgcaaggtactgaccgtcat
caccagccaacggtgcctagggtatcagctagtcagtcaacaatggccatgtcatcttta
atgccttctgcttctatggagcccataagtgaatgggcagctgatggcaatagaatgaca
atgcataacagaagtgcttctgagccagatattggtagaactccaagacaggttgagtca
ccaaagggaacctcgtctaatgcgcaagggaaaacatcaggttcaggcacagcatctcgc
tttggtcgttttggttttggttcacagcttttacaaaggacagtgggactcgtcttgagg
ccccgttcagatcgacaggctaaattgggtgaaacgaacaagttctattatgatgaaaag
ctcaagagatgggtagaggaaggtgcagaacctccggctgaagaagcagccttgccaccc
cctcctacaacttcagccttccagaatggagtgtctgactacaacttaaaatctgcactg
aagagtgatggatctcccactaatgggagcccaacatctaagactccaaatcctgtggaa
catgcttcggggataccacctattccaaccagttcaaatcagttctcagctcgtgggcgg
atgggtgtccgtgcaaggtatgttgacaccttcaaccaaggaggtcgaagctcggcaaag
ttattccagtcgccatcggttccatctgtcaaacctgctgtttctgcaaatgcaaagttt
tttgttcccacacctctcccatcaagtggaaattcaacagaaaatgtagcagaaaatgtg
caagaaagcgcaggatttgcagaatatccttcaacctctattgatgactctctccaatct
tcctcattgtcttcaaaaatgaatatgcaaagagccccgagcatggataatattccaaga
agggagagaacaataaatgataatatacccatgtcatctcatgcacgacgaacagcatca
tggagcggaagcttcagcgattcatttagccctcccaaaatggtggaaaataaacctttg
ggggaggcagcgggcatgcctccatcgtctttcatacctggtgatccttctataacacag
atgccaatgaatggtggcggtattggagatgacctacacgaggtggccctttag
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