KEGG   Manihot esculenta (cassava): 110609789
Entry
110609789         CDS       T05761                                 
Name
(RefSeq) protein SMG7
  KO
K14409  protein SMG7
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110609789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110609789
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     110609789
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110609789
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 110609789
NCBI-ProteinID: XP_021605282
LinkDB
Position
2:10707405..10714222
AA seq 978 aa
MMIVQMDKMSAPSSRERAQRLYEKNIELENKRRKSAQARIPSDPNAWQQMRENYEAIVLE
DHGFSEQHNIEYALWQLHYRRIEELRAHFSAALANGGSNTSQGVKVPTRPDRITKIRLQF
KTFLSEATGFYHDLILKIRAKYGLPLGYFSEDSDNRVVLEKDAKKSSDMKKGLISCHRSL
IYLGDLARYKGLYGEGDSKTREYAAASSYYLQAASLWPSSGNPHHQLAILASYSGDELVA
VYHYFRSLAVDNPFTTARDNLIVAFEKNRQIYTQLLGDSKGSVVKDSSVRLTSKGRGKGE
SKPAVKDTNLEANVVNDGTSNIREIHKSFCIRFVRLNGILFTRTSLETFATVLSLVSGDF
CDLLSRGPEEQLNFGADVVENAIFIVRLISILIFTVHNVRREAEGQTYAEIVQRAVLLQN
ALTAVFELMGHILERFVQLHDPSASYLLPGILVFVEWLACCPDVASGSDADEKQSTVRLK
FWNHCTSFLNKILSFWSMSLDDNEDDTCFKNMSHYEEGETGNRLALWEDFELRGFLPLLP
AQSILDFSRKHSFGSEGSKEKIARVKRILAAGKALANIARIDQKTIFYDPRMKKFVIGVE
PQISDVSMLAFDSGLPKTNDLVQEIQPQKVINVGVLPPNAQPFIEGDEEDEVIVFRPAAT
EKRNGLSPKWAPYDSLKQNPDVSADLKFYGGAVSSPLDMLQHSAFDAGSQISASSGISAS
QHLQPIQPPASKWLMEEAASLANSLNAVRFMENGHVTEHDLLKDLGIGHPATHSLPLQQP
VNVNASFFYNQTKVPEAVIPSKVDVIAENLAVKTSAALPAGLKKTPVSRPVRHLGPPPGF
NHVPLKQVNEHVSGADLMSENSLTDDYSWLDGYQLPSSTKGSVLNNMSTITSEAMPQYIN
SSNGLSGTASFPFPGKQVSSLQFQTEKQKGWQNYQAFEHLRLQQEQQLQQQLLNGNQQFT
PMSEQYHGKSIWSGRYIV
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgatgattgtgcagatggataaaatgtctgctccttcgtctcgggagcgtgcacaacgt
ctttatgagaagaatattgaactggagaataagcgtcggaagtcagctcaggcaagaatt
ccgtcagatcccaatgcctggcaacagatgcgtgagaactatgaagctatagttcttgaa
gatcatggtttttctgagcagcacaatatagaatatgctctttggcagttgcattatagg
cgcatcgaggaactgagagcccacttcagtgctgccttagctaatggtggctcaaataca
tctcagggagtgaaagttcccactcgaccagaccgtattacaaaaataaggctgcagttt
aaaacatttctttcagaagcaactggattctatcatgatctcatcctgaaaatcagagcg
aagtacgggcttcctctgggatacttctctgaggattcagataatagagttgttttggaa
aaagatgcaaaaaaatcgtccgatatgaagaaaggtttgatctcttgtcaccgcagttta
atatacttgggtgaccttgcaaggtacaagggactttatggggaaggtgactcaaagaca
cgcgaatatgcagctgcttcaagttactatttgcaagctgcttccttgtggccatctagt
gggaacccccatcatcagcttgctattttggcatcctattcaggagatgagttggtggct
gtgtatcactattttaggagtctggcggttgataatccctttacaacagcacgagataac
ctgattgttgcttttgagaagaaccgacagatttacactcaactacttggggattctaaa
ggatctgtggtcaaggattcatctgtgcgcttgaccagcaagggtagagggaaaggggaa
tcaaaacctgcagttaaagacacaaatttggaagccaatgttgtgaatgacgggacatct
aatatccgtgagatacataaatcattctgtatccggtttgtccgcctgaatggtattcta
ttcacacgcaccagcctggagacatttgctacagttctctcattggtcagtggtgacttc
tgtgatcttctttcacgtgggccagaagagcagctaaattttggtgcagatgttgttgaa
aatgccattttcattgtacggcttatttctattcttatcttcactgttcacaatgtgagg
agggaggctgagggtcagacgtatgctgaaattgttcagcgtgctgttctactgcagaat
gcgcttactgcagtttttgagttaatgggacacatattggagaggtttgtgcagctgcat
gatccttctgctagttatctcttacctggcattctggtttttgtagaatggttggcctgt
tgccctgatgttgcatcaggcagtgatgctgatgagaaacagtccactgttagattgaag
ttttggaaccattgtacatcattcctgaataagatcttgtcattttggtcaatgtctctt
gatgataatgaagatgatacatgctttaagaacatgagccattatgaagaaggagaaacc
ggaaataggcttgctttatgggaggattttgagttgaggggatttttgccacttcttcct
gcacaaagcattttggacttttcgaggaagcactcttttggaagtgaaggcagtaaggaa
aagatagctcgtgttaaaaggattctagctgctggaaaggctttagcaaatattgctagg
attgatcaaaaaacgatattttatgatccaaggatgaagaaatttgttataggtgtggag
cctcaaatttcagatgttagcatgttggcttttgattctggcctgccaaaaactaatgac
ttggtgcaagaaatccagcctcagaaagtcattaatgtgggagttttgccgcctaatgca
cagccgtttatagaaggggatgaggaggatgaagttattgttttcaggccagcagcaaca
gagaagcggaatggacttagtccaaaatgggctccctatgatagcttgaaacagaatcct
gatgtatccgctgatctgaaattctatggtggtgctgtttcatctccgcttgatatgttg
cagcattctgcttttgatgcaggttctcaaatatctgcatcatctggtattagtgcctcc
cagcatctgcagccaattcaaccacctgcctcaaagtggttaatggaagaagctgcctca
cttgcaaatagcttgaatgctgttaggttcatggagaatggacatgtaacagaacatgac
ttgctaaaagatttaggcataggccatcctgctacacattcacttcccctccaacaacct
gtaaatgttaatgctagctttttctacaatcagactaaagtgccagaagctgtgattcca
tcaaaggttgatgttattgctgaaaatttggctgtgaagacatcagcagctttgccagca
ggcttgaaaaaaactcctgtcagccgacctgtaaggcaccttgggcctcctccaggcttt
aatcatgttcctcttaaacaagtaaatgaacatgtgtctggcgcagatttgatgagtgag
aattcactgacagatgactatagttggttggatggctatcagttgccatcatcaacaaaa
ggctctgtgctcaataatatgtctaccatcacttctgaagcaatgcctcagtatatcaat
agcagtaatggcttgagtggaacagctagcttcccttttcctggaaaacaggtgtcatcc
ctgcaattccagacagaaaaacagaaaggatggcagaattaccaggcctttgagcatctg
aggttacaacaagagcagcagttgcagcaacaactcctaaatggaaatcagcaatttact
ccaatgtctgagcaatatcatggaaagtccatctggagcggtcgttatattgtgtga

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