Manihot esculenta (cassava): 110609910
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Entry
110609910 CDS
T05761
Name
(RefSeq) ATP-dependent DNA helicase DDM1 isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110609910
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110609910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
110609910
NCBI-ProteinID:
XP_021605438
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All DBs
Position
2:7267418..7275598
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AA seq
756 aa
AA seq
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MVAKSEMKNVSADSPTSVLEEEEKCKDKTGDTLENDILLDAKNGDVSLISRAMTEEEEKL
LEARLKQEAKEEGQPEVAPHLNSTQFTKLDELLTQTQLYSEFLLEKMDEITCNGVQQESE
PAVRKRGRGPKRKAAAQYNSRKAKRAVAAMLTRSKETENHEDTSLSEEESLEKEQSELVP
LLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGNGLHGPYLV
VAPLSTLSNWVNEFSRFAPSVNAIIYHGDMKQRNEIRSKYMPRSIGPKFPIIVTSYEIAL
SDSKKYLRHYNWKYLVVDEGHRLKNSKCKLLKELKRLPIENKLLLTGTPLQNNLAELWTL
LNFILPDIFQSHDEFESWFDLSGKTNGEALKEELEEKRRAQVVAKLHAILRPFLLRRMKA
DVEQMLPRKKEIILYATLTEHQKNFQDHLINKTLEGYLREKVDTGRGMKGKLNNLMIQLR
KNCNHPDLLESAFDGSWFYPPVEQIVEQCGKFRLLDKLLNRLFELEHKVLIFSQWTKILD
IMDYYFSERGYEVCRIDGSVKLDERKRQIQEFNDVNSNYRIFLLSTRAGGLGINLTAADT
CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIG
KGQFHQERMKSNAMVDVEEEDILGLLRDEETAEDKLIQTDISDEDLERVLDRSDLIGCPV
DDKENDAPVGSFPLKGPGWEVVIPTATGGMLSTLSS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaagagcgagatgaagaacgtctccgctgattcacccacttcggttcttgaa
gaagaggagaaatgcaaggacaaaactggagacaccttggaaaatgatatcctactagat
gcaaaaaatggggatgtttctcttatttcaagagccatgacagaggaggaagaaaaattg
ttggaagctcggctgaaacaagaagcaaaggaagagggacagccagaagtagcacctcat
ttgaatagcacccagttcaccaaattagatgagcttctaactcaaacgcaactctactca
gagttcttgctggaaaaaatggatgaaatcacttgtaatggagtgcagcaggagagcgaa
ccagctgtgagaaagagaggtcgtggcccaaaaagaaaagctgctgcacaatataattct
aggaaagccaagagggctgttgctgcaatgctgacaagatctaaagaaactgaaaaccat
gaagatacaagtctgtccgaggaagaaagccttgagaaagagcagagtgagctggtacct
ttgttgactggtgggaagttgaagtcctatcaaatcaaaggtgtgaaatggttgatttcc
ttgtggcaaaatgggctcaatgggatccttgctgatcaaatgggacttggaaaaactata
caaacaattggtttccttgcacatctaaaagggaatgggttgcatggtccatatttagta
gttgctcctctttctactctctcaaattgggtaaatgagttttcaaggtttgcaccttct
gtaaatgcaattatctaccatggtgacatgaaacaaaggaatgagataaggagtaaatac
atgcctagatctattgggcccaagtttcccattattgttacttcttatgagattgcattg
tcagactcgaaaaagtatttgagacattacaattggaaatatcttgtggttgatgagggg
caccggttgaagaactcaaagtgcaaattgcttaaggaattgaaacgcttgcctatagaa
aataagcttctactaactgggacacctctgcagaacaatttggctgagctttggacactg
ttaaatttcattttgcctgatattttccaatcccatgatgaatttgagtcatggtttgat
ctgtcaggaaagactaatggtgaagcattgaaggaggagctggaagagaagagaagggcg
caggtggtagctaaacttcatgccatattgcgtccatttcttctccggagaatgaaggct
gatgttgagcagatgctccctcggaaaaaagagataattttatatgctaccttgactgag
catcaaaagaactttcaggatcatttaattaataagactttggagggttatttacgagag
aaggtggatacaggacgtggtatgaaagggaagctcaacaatttgatgattcagctgcgg
aagaactgcaaccatcctgacctactagagtcggcttttgatggctcatggttctaccct
cctgtggaacagatagttgagcagtgtggcaagttcaggttgctggacaaattgttgaat
aggctatttgaacttgagcataaagtcctgatattttctcaatggactaagattttggac
ataatggactattattttagtgaaagaggttatgaagtttgtagaattgatggcagtgtg
aagttggatgaaaggaaaagacagattcaggaattcaatgatgtgaatagcaactataga
atatttcttctcagcactagagctggcggattgggtatcaacctcactgcagccgatacc
tgcatactatacgacagtgactggaaccctcaaatggatctgcaggccatggatagatgc
cacagaattggccagaccaagcctgttcatgtttacagacttgcaacagctcagtccgtt
gagggtcgcattttgaaaagagcatttagtaagctgaagcttgagcatgtggtcataggt
aaggggcagtttcatcaagaaagaatgaagtctaatgccatggttgatgtggaggaagag
gacatactagggctgcttcgagatgaagaaactgctgaagacaagttgatacagacagat
atcagtgatgaggatttagaacgggtactggatcgcagtgacctgattggatgcccagtg
gatgacaaagaaaatgatgctccagttggctctttccccctcaaaggacctggttgggag
gtggtaataccaactgcaactgggggcatgctctccacccttagcagttaa
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