Manihot esculenta (cassava): 110609916
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Entry
110609916 CDS
T05761
Name
(RefSeq) agamous-like MADS-box protein MADS1
KO
K09264
MADS-box transcription factor, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110609916
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
110609916
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF2115
Motif
Other DBs
NCBI-GeneID:
110609916
NCBI-ProteinID:
XP_043815377
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Position
1:complement(32235460..32241028)
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AA seq
295 aa
AA seq
DB search
MDSEQEITWRNRVLCTCVTISILNSQLRAEKKRVQELLSPFSIPCLFLYQVATTEFHNQE
PDQGPSLRKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEIALIVFSTR
GRLYEYANNSVRGTIERYKKANADSSNPASASEVNTQFYQQESSKLRRQIREIQNLNRHI
LGEALSTLTLKELKNLEGRLEKGISKVRSKKNEMLFAEIEYMQKREIELQNDNMFLRAKI
AENEREQQQQTNIMAGGSVYGSAPSQQYDRNFFPVNLLEPNNHYSRPDHTALQLV
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaacaggaaatcacatggaggaatagggtcctctgcacctgcgtcaccatc
tcaattctcaacagccagctcagagcggagaaaaagcgagttcaagaactactttctccc
ttttccattccttgtttgtttctttaccaggttgcaaccacggagttccataatcaagaa
cccgatcaaggcccttcccttagaaagacgggaaggggcaagattgaaatcaaaagaatc
gaaaacacaactaatagacaagtcaccttctgcaagcgtcgtaatggtttgcttaagaaa
gcttatgaattatctgttctttgtgatgctgaaatcgctctcatagtcttctctacccgt
ggccgtctctacgagtatgctaataacagtgttagaggaacaattgaaaggtacaagaaa
gccaatgcagactcctcaaacccagcatctgcttctgaagttaacactcagttctatcaa
caagaatcctccaagctacgcaggcaaatacgggaaattcaaaacttgaacaggcatatt
ctgggtgaggcacttagcactttgaccttgaaggaactcaagaacctggaaggcagattg
gagaaaggaatcagcaaagttagatccaaaaagaatgaaatgctgtttgctgaaattgag
tacatgcagaaaagggagattgagctgcaaaatgacaatatgttcctgcgtgcaaagata
gctgaaaatgaaagagaacagcagcagcaaacgaatataatggctggaggttctgtgtac
ggatctgcaccttcgcagcaatatgacaggaacttcttccctgtaaacctcctggaaccc
aataaccactattctcgcccagatcacactgcgcttcaacttgtgtaa
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