Manihot esculenta (cassava): 110609966
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Entry
110609966 CDS
T05761
Name
(RefSeq) ATP-dependent DNA helicase DDM1 isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110609966
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110609966
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DBINO
BLI1
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
110609966
NCBI-ProteinID:
XP_043814160
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All DBs
Position
1:32765565..32774255
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AA seq
753 aa
AA seq
DB search
MVAENEMKNDGSANSPTSVLEDEENCNDKTGDNLEKDVLLAAKNGDSSLVSKAMAEEEEK
LLEARIREEAEKEEELEEAPQLNDTQFTKLDELLNQTQLYSEFLLEKMDEITRNGVELES
ETTDKKRGRGSKRKAAAQYNSGKAKRAVAAMLTRSKEAEKTEDGNLTEEERLEKEQRELV
PLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGNGLDGPYI
IIAPLSTLSNWVNEISRFAPSINAIIYHGNKKQRDEIRRKYMPRSIGPKFPIVVTSYEVA
FFDARKYLRHYNWKYVVVDEGHRLKNSKCKLLKELKHLAMENKLLLTGTPLQNNLAELWS
LLNFILPDIFQSHDEFESWFDLSGKNNGEAMKEELEEKRRAHVVAKLHAILRPFLLRRMK
ADVEWMLPRKKEIILYATLTEHQKNFQDHLINKTLEGHLREKLDTGRGLKGKLNNLMIQL
RKNCNHPDLLESAFDGSYLYPPVEQIVSQCGKFRLLDKLLNRLFALKHKVLIFTQWTKIL
DIMDYYFSEKGYEVCRIDGNVKLEERKRQIQEFNDVNSDYRIFLLSTRAGGLGINLTAAD
TCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEVRILKRAFSKLKLEHVVI
GKGQFHQERTKPNVINDLEEEDLLALVRDEESAEDKWIQTDISDEDLERVMDRSDLIGDS
AENDVVDGVPLKGPGWEVVIPTATGGMLSTLNS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgagaacgagatgaagaatgacggctctgctaattctccgacatcggttctt
gaagacgaggagaattgcaatgacaaaactggagacaacttggaaaaagatgtccttcta
gctgcaaaaaatggtgattcttctcttgtatcaaaagccatggcagaggaggaagaaaag
ctgttggaagctcgaataagagaagaagcagagaaagaggaagagctagaggaggcacct
cagttaaatgacacccagtttaccaaattagatgagcttctgaatcaaacacaactatac
tcagagttcttgctggaaaagatggatgaaatcactcgtaatggagtggagctggagagt
gaaactactgacaaaaagaggggtcgtggctcaaaaagaaaagctgctgcacaatacaat
tctgggaaagccaagagggctgttgctgcgatgctgacaagatctaaagaagctgaaaag
actgaagatggaaatctgaccgaggaagaaagacttgagaaagagcagagagagctagta
cccttgttgactggaggaaagttgaaatcctatcaaattaaaggtgtgaaatggttgatt
tctttgtggcaaaatgggctgaatgggatccttgctgatcaaatgggattgggaaaaact
attcaaacaattggtttccttgcacatttaaaaggaaacggcttagatggtccttatata
ataattgctcctctctctaccctctcaaattgggtgaatgagatttcaaggtttgctccc
tctataaatgccattatctatcatggcaacaagaaacaaagggatgagataaggagaaaa
tacatgcctagatctattgggcccaagtttcccattgttgtcacatcttatgaggttgct
tttttcgatgcaaggaagtatttgaggcattacaattggaaatatgttgtggttgatgag
gggcaccggttgaaaaactcaaaatgcaaattgctgaaggaattgaaacacttagctatg
gaaaataagcttctgctaactgggacacctctgcagaacaacttggcagagctatggtcg
ttgttaaatttcattttgcctgatattttccaatcccatgatgaatttgagtcgtggttt
gatttgtcaggaaagaataatggtgaagcaatgaaagaggaattagaagagaagagaagg
gcacatgtggtagctaaacttcatgccatattgcgtccatttctccttcggaggatgaag
gctgacgttgaatggatgcttcctcggaagaaagagataattttatatgctactttgact
gagcatcagaagaactttcaggatcatttaatcaataagactttggagggccatttaaga
gagaagctggatacaggacgtggtttgaaaggaaagctcaacaatttgatgattcagctt
cgaaagaactgcaaccaccctgatctcttagaatcagcttttgatggctcatatctatac
ccacctgtggaacagatagttagtcagtgtggcaagttcaggttgctggacaaattgttg
aataggttatttgcacttaagcacaaagtcctaatatttactcagtggactaagatcttg
gacataatggactattattttagtgaaaaaggttatgaagtatgcagaattgatggcaat
gtgaagttggaggaaaggaaaagacagatccaggaattcaatgatgtgaatagcgactat
aggatatttcttctcagcactagagctggtggattgggcatcaaccttactgcagcagat
acctgcatactatatgatagtgactggaaccctcaaatggatttgcaggccatggacaga
tgtcatagaattggccagaccaagcctgttcatgtttacagacttgcaacagctcaatcc
atcgaggttcgcattttgaaaagggcatttagtaagttgaagcttgagcatgtggtcatt
ggtaaggggcagtttcatcaggaaaggacgaagcctaatgtcatcaatgatttggaggaa
gaggacttgttagcactggttcgagatgaagaaagtgctgaagacaagtggatacagacg
gatattagcgatgaggatttggaaagggtaatggatcgcagtgacttgatcggagattca
gcagaaaatgatgtggttgacggagtcccccttaaagggcctggttgggaggtggtaata
ccgactgcaactgggggcatgctttctacccttaacagttaa
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