Manihot esculenta (cassava): 110610008
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Entry
110610008 CDS
T05761
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110610008
Enzymes [BR:
mesc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
110610008
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110610008
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GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
110610008
NCBI-ProteinID:
XP_021605554
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Position
2:complement(26611760..26614936)
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AA seq
390 aa
AA seq
DB search
MFFNVSRASRLSGANWESLVLPVIEFSSVFHPGIFKTMREIKVKVKGSSGLCTLASDGDS
VSVDEQKTCSSSSSVQSTPEIEKKYVHRVYDAIAPHFSSTRYAKWPKVATFLNSLPAGSV
ILDAGCGNGKYLGLNPECFYMGCDISAPLIKICADRGHEVLVGDAVNLPYRTGFGDAAIS
IAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDGSLVAKWTPLTQKYVEEWI
GPGSPRVRSPSCITLESIPENEENNNSKEHVKDTKGNGDGELSNAMDLASRTENDFIVSE
DERTAKNQQEYFVPWHLPYHRAEVSGASACALANGLAKKDDKKGAVVYNRYYHVFSEGEL
ERLATGMKNAVVVDRFFDKSNWCIILEKTS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaatgtttcaagagcgagtagattaagtggagcaaactgggagtccttagtt
ctacccgttattgagtttagtagtgtctttcatcctggaatcttcaaaactatgagagaa
atcaaagtgaaggtgaaaggatcttctggattgtgtactcttgcatctgatggagattct
gtatcagtggatgaacaaaaaacatgttcctcttcctcaagtgtgcaatccacccctgaa
attgaaaagaagtatgttcatcgtgtttacgatgctattgcaccccattttagttccacc
aggtatgccaaatggccgaaagttgcaacctttttgaattcattgcctgctggttctgta
atattggatgcaggatgtggaaatggcaagtatttgggtttaaatcctgagtgcttttat
atggggtgtgatattagtgcacccctcatcaaaatttgtgcagatagaggacatgaagtt
ctggttggggatgcagtaaatcttccttacagaactgggtttggcgatgctgcaatttcc
atagctgtgttacatcacctaagtacagagaataggaggaagaaggcaattgaagaatta
gtccgagttgtgaaaaagggtggtttggtactaataactgtttgggctgtagagcaggaa
gatggatcattggttgctaaatggactcctctcacccagaaatatgtagaagagtggata
gggcctggtagtcctcgggttcgaagcccttcttgcatcactttggaaagcatcccagaa
aatgaggaaaacaacaattctaaagagcatgtaaaagacaccaagggtaatggagatggg
gagttgagtaatgctatggatttagcctctcgaactgaaaatgatttcatagtttctgaa
gatgagaggactgcaaagaatcaacaggaatattttgtcccttggcatttaccatatcat
cgcgctgaagttagtggcgcatctgcttgtgctcttgcaaatggtttggccaaaaaagat
gataaaaagggtgctgtagtgtacaacagatactaccatgttttcagtgaaggtgaactt
gaaaggttagcaactggcatgaaaaatgcagtagtagtagatcgattttttgacaaatca
aactggtgcatcattcttgagaaaacttcatga
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