Manihot esculenta (cassava): 110610028
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Entry
110610028 CDS
T05761
Name
(RefSeq) agamous-like MADS-box protein TM6
KO
K09264
MADS-box transcription factor, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110610028
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
110610028
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF6827
DUF3627
Spectrin_Anc-1_2
Cas3_I-F_Cas2
Motif
Other DBs
NCBI-GeneID:
110610028
NCBI-ProteinID:
XP_021605589
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Position
2:complement(7818431..7821199)
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AA seq
227 aa
AA seq
DB search
MGRGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEFISP
TTTTKKVFDQYQETLGIDLWKTHYERMQEHLRKLREINNKLRRDIRQRMGEDLDDLSMDE
LFVLEQRMDSALELIRDRKYHVIKTQTETCKKKVKNLEERHGDLLLEYEAKYEDPQYGLV
ENEGDYESAIALANGASNLYAFRLHHGHPPTNFHHGGGFGSHDLRLA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtggaaagatcgagatcaagaggattgagaacgctactaacaggcaggtcacc
tactccaagcgaagaaatggtattttcaagaaagcacaagaactcactgttctttgtgat
gctaaggtttctcttatcatgttctctaacactggaaaattccatgagttcattagcccc
accacaacgacgaagaaggtgtttgatcaatatcaggagacgttagggatagatctgtgg
aagacgcattatgagagaatgcaagagcacctaagaaagctgagagagatcaacaataag
ctgagaagagacatcaggcagaggatgggtgaggatttagatgatctgagcatggatgag
ctgttcgttcttgagcaaaggatggattctgcattggagctaatacgtgacaggaagtac
catgtgatcaaaacacagacagaaacctgcaagaagaaggtaaaaaatttggaggaaaga
catggagacctcctgctagaatatgaggcaaaatatgaggatccacaatatgggttagtg
gagaatgaaggagattatgagtctgcaattgcacttgctaatggggcatctaacctctat
gctttccgcctgcaccacggccatccgccgactaacttccaccatggaggaggctttgga
tctcatgatctccgcctcgcttaa
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