Manihot esculenta (cassava): 110610030
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Entry
110610030 CDS
T05761
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00061
Fatty acid biosynthesis
mesc00071
Fatty acid degradation
mesc01100
Metabolic pathways
mesc01212
Fatty acid metabolism
mesc04146
Peroxisome
Module
mesc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110610030
00071 Fatty acid degradation
110610030
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110610030
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mesc01004
]
110610030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mesc04147
]
110610030
Enzymes [BR:
mesc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110610030
Lipid biosynthesis proteins [BR:
mesc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110610030
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of breast milk
110610030
Exosomal proteins of breast cancer cells
110610030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110610030
NCBI-ProteinID:
XP_043810354
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Position
2:12785197..12791995
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AA seq
696 aa
AA seq
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MVTYIVAVLVPLVVTFLFRNSKNSAKKRGMPVDVGGEPGYAVRNAQFPTPLETAWEGVFT
LAELFQYACKSYGDKYLLGTRKLISTENEVAPDGRSFEKLHLGEYKWLTYAQVFERVCNF
ASGLVHIGHRRQERVAIFADTRAEWFISLQGCFRRNLTVVTIYASLGEDALRHSLNETEV
TTVICGNKELKKLVDISGQLDTVKRLICMDDEIPSSASVEQSGSWTIISLSNVEKLGQEN
PVEADLPLSSDIAVIMYTSGSTGLPKGVMMTHANVLAVVSSVRTIVPGLESKDVYLAYLP
LAHILELVAEHIVAGVGSAIGYGTPLTLTDTSNKIKRGTKGDASALRPTVMASVPAILDR
VRDGVRKKVDATGGLNKKLFDLAYARRLSALNGSWFGAWGLEMLLWNFLMFRKVRAVLGG
RIRFLLSGGAPISGDTQRFINICLGAPIGQGYGLTETCAGGTFSEFDDSSVGRVGNPLPS
SFIKLIDWPEGGYLTSDSPMPRGEIVISGPNVTVGYFKNEEKTKEVYKVDERGMKWFYTG
DIGQFHPDGCLEIVDRKKDIVKLQHGEYVSLGKVEAALTASPHVDNMMLHADPFHGYCVA
LVVPSQPALEKWASNQGIEFTDFADLCEKNEIIKEVQASFLKEAKKARLEKFEIPAKIKL
VCNPWTPDSGLVTAALKIKREAIRKAFSEELSKLYE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtcacttatatagttgctgttctcgttcctctagtcgtcacttttctcttccggaat
tccaagaacagtgcgaagaaacgtggcatgccagtcgatgttggcggggaacctgggtat
gctgtacggaatgctcagtttccgacgccgttggaaactgcctgggagggcgtgtttacc
cttgctgagcttttccagtatgcctgcaagagctacggggataaatacttgctgggaacg
cggaagttgatctcgacagagaatgaagttgctccagatgggaggtctttcgagaagctt
catttgggcgagtacaagtggctcacttatgctcaagtgttcgaaagagtttgtaacttt
gcttctggtttggttcatattgggcatagacggcaagaacgtgtcgccatatttgctgat
accagagcagaatggtttatttctctgcagggttgctttaggcgcaatctcactgtggtt
actatttatgcatctctaggagaggatgctctgcgtcactcgttaaatgagacagaggtt
acaactgttatatgtgggaacaaagaactgaagaaacttgtggacataagcggacaactt
gatacagtgaaacgtttgatttgtatggacgatgaaattccatctagtgcatcagttgag
cagagtggttcctggacaatcatctcactttctaatgtggagaaacttggtcaggaaaat
cctgttgaagctgatttacctctatcaagtgatattgctgtaattatgtacacaagtgga
agtactggactgcctaagggtgtaatgatgacacatgctaatgtcctggctgtagtttct
tcagttaggacaattgttcctggccttgagagcaaggatgtttatctggcatacctacca
ttggctcatatccttgaattagttgctgagcatatagtagcaggtgttggaagtgctata
ggatatggaacccctttgacacttactgatacttcaaacaagatcaaaaggggtacaaag
ggggatgcaagtgccctgaggccaaccgtgatggcatctgtcccagcaattcttgatcgt
gttcgagatggagtgcgcaagaaggtggatgcaacaggaggcctaaataagaaactgttc
gacttggcgtatgcccgtcgactatctgcattgaatggtagttggtttggagcttggggc
ttagaaatgctactttggaatttccttatgtttaggaaggttcgagcagttttagggggt
cgtatccgttttttgctttctggaggtgctcctatttctggtgatactcaaagatttatc
aacatttgccttggggctccaataggccaaggctatggtcttactgagacttgtgctggc
gggactttttcagaatttgatgattcatctgttggtcgagttggtaatccacttccttcc
tcatttattaagttaatagattggcctgaaggtggatatttaactagtgattcaccaatg
cctcgtggggaaatagttatcagtggtccaaatgtaactgttggttatttcaagaatgaa
gagaaaacaaaggaagtgtacaaggttgatgagagaggaatgaagtggttctacacaggc
gacattgggcagtttcatcctgatggttgccttgagatagttgaccgtaaaaaggacata
gtcaaacttcagcatggggaatatgtgtctttgggaaaggttgaggctgctctcactgcg
agcccccatgttgataacatgatgttgcatgctgatccatttcacggttactgtgtggcc
cttgtggtaccttcacaacctgctctggaaaaatgggcctcgaatcagggaattgagttc
actgattttgcagacctgtgtgagaaaaatgaaataataaaagaagtgcaagcatcattc
ctcaaggaagcgaagaaagcacgtttggagaagtttgagatcccagcaaaaattaaatta
gtttgtaatccatggacccctgattctggtctggtcacggccgctctcaagatcaagaga
gaagccattaggaaggccttctccgaagaactctccaagttatatgaataa
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