Manihot esculenta (cassava): 110610110
Help
Entry
110610110 CDS
T05761
Name
(RefSeq) tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00260
Glycine, serine and threonine metabolism
mesc00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
mesc01230
Biosynthesis of amino acids
Module
mesc_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110610110
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
110610110
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
110610110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
110610110
NCBI-ProteinID:
XP_021605673
LinkDB
All DBs
Position
2:complement(4922547..4925392)
Genome browser
AA seq
504 aa
AA seq
DB search
MIPLSPSSAISFPISSRSNTSIRGEKQWLGCFLMKTKPTCLRLSNGFRARAKAASNANWK
AIDIPPQWYNLISDLPVKPPPQLHPKTFEPVKPEDLAALFPDELIKQEATNEKFIDIPEE
VLDIYSLWRPTPLIRAKRLEKLLNTPAKIYYKYEGVSPAGSHKPNTAVPQVFYNARQGVK
NVVTETGAGQWGSSLAFACSLFGLDCEVWQVRASYDQKPYRRLMMETWGAKVHPSPSSIT
HAGREILQKDPSSPGSLGIAISEAVEVAARNTDTKYCLGSVLNHVLLHQTIIGEECLKQM
EAVGETPDVIIGCTGGGSNFAGLSFPFIREKLSGKINPVIRAVEPTACPSLTKGVYAYDY
GDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGFMEAIAIPQTECFQA
ALQFARSEGLIPAPEPTHAIAATIREALHCRETGEAKVILMAMCGHGHFDLTSYEKYLRG
NMVDLSFEEEKIQASLARVPQVKA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgattcctctgtccccttcctctgcgatctcatttcccatttcaagccgatcaaacacc
agtatcagaggtgagaagcaatggcttggttgttttttaatgaaaacaaagccaacgtgt
ttaaggctttcaaatgggtttagagcaagagccaaagctgcttcaaatgctaattggaaa
gcaattgatattcctccacaatggtacaatctcatttcagatcttcctgtgaaacctcct
cctcaactgcatccaaaaacttttgaacctgtcaaacctgaggatttagctgctttgttt
cctgatgagttgattaagcaggaagcaaccaatgaaaaattcatagatatcccagaagaa
gttcttgacatttacagcctttggcgcccaactccattaattagggccaagaggttggag
aaacttctcaatacaccagccaaaatttactataaatatgaaggtgtgagcccagctgga
tcacacaaacctaacactgcagtcccacaagttttttataatgcaagacaaggtgttaag
aatgttgtgacagaaacgggtgctggccaatggggaagttcgctggcctttgcgtgcagc
ttatttggtcttgactgtgaggtgtggcaggtacgagcttcttatgatcagaaaccatat
cgtagattgatgatggaaacttggggtgcaaaagtacatccatctccatcaagcattact
catgcaggtagagaaatccttcagaaggatccttcaagcccaggaagtttaggaatagct
atttcagaagctgttgaggttgcagcaagaaatactgataccaagtattgcttgggcagt
gtacttaatcatgttttgttacaccagaccattataggtgaggagtgcctaaagcaaatg
gaagctgtcggtgaaactcctgatgtgatcataggatgtactggtggcggctccaacttt
gcgggactcagtttcccattcattagagagaagctcagtgggaaaatcaatcctgtcata
agagcagttgaacctacagcatgcccttcgctaacaaagggtgtttatgcatatgattat
ggtgatacagctgggatgactccattaatgaagatgcatacacttgggcatgacttcatt
cctgatcctattcatgctgggggcttgcgttaccatggtatggcaccattgatttcacat
gtgtatgaattgggttttatggaagcaattgcaattcctcagaccgagtgctttcaagct
gccttacaatttgctagatctgaagggctaatacctgcaccagaaccgactcatgcaatt
gctgccaccatcagggaggctctccattgtagagaaactggagaagcaaaggttattctc
atggcaatgtgtggacatggccattttgacctaacatcttacgagaagtatttgcgagga
aatatggttgacttgtcatttgaagaggagaaaatacaggcatcattagccagagttcct
caggtcaaggcatga
DBGET
integrated database retrieval system