Manihot esculenta (cassava): 110610149
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Entry
110610149 CDS
T05761
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1 isoform X1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110610149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110610149
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110610149
Enzymes [BR:
mesc01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
110610149
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110610149
Chaperones and folding catalysts [BR:
mesc03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
110610149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
NTase-conflict
Motif
Other DBs
NCBI-GeneID:
110610149
NCBI-ProteinID:
XP_021605714
LinkDB
All DBs
Position
2:complement(8066277..8069531)
Genome browser
AA seq
130 aa
AA seq
DB search
MASANQVRASHILVKHEGSRRKASWKDPEGHIIKNTTREAAVTQLKVFRDDIISGKAKFE
DIASRFSDCSSAKRGGDLVQIKRYANIVTGPFGRGQMQKPFEDATYALKVGEISDIVDTD
SGVHIIMRTG
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagccaatcaggtcagggcatctcacatacttgtaaagcacgagggctctcga
aggaaggcgtcctggaaggatcctgaaggtcacataatcaagaacaccaccagagaagcc
gccgtcactcagcttaaagtctttcgtgacgacatcatttctggcaaggctaaatttgag
gacatcgcctctcgcttctccgattgtagctccgccaagcgcggcggcgatctcgtccaa
ataaagcggtatgcaaacattgtcacaggtccatttggtcgaggccagatgcagaagcct
tttgaagatgcaacatatgcccttaaagttggtgagataagtgacatcgtggatactgac
agtggggtgcacatcatcatgagaactggttaa
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