Manihot esculenta (cassava): 110610171
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Entry
110610171 CDS
T05761
Name
(RefSeq) agamous-like MADS-box protein MADS9
KO
K09264
MADS-box transcription factor, plant
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110610171
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
110610171
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GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
Atg11_middle
Motif
Other DBs
NCBI-GeneID:
110610171
NCBI-ProteinID:
XP_021605746
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Position
2:13253222..13255369
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AA seq
212 aa
AA seq
DB search
MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
STTLIDILDRYHKQSGKSRLWDAKHENLSNEIDRIKKENDNMQIELRHLKGEDITSLHHQ
ELMVIEEALDNGLASVRDKMMEYYNMKKTNDEILEDMNKRLRFFWQQQEMAMEENVREME
NPYHQQRVRDYNSQMPFAFRVQPIQPNLQERM
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggcaagattgagatcaaaaggatcgagaactcaagcaacaggcaagtgacc
tactccaagagaagaaatgggatcatcaaaaaagctaaggaaatcacagttttgtgtgat
gctcaggtttctttggttatctttgctagttctgggaagatgcatgagtactgtagccct
tctaccacgttgattgatattctggacaggtatcacaagcaatctggtaaaagccggctg
tgggatgctaaacatgagaacctcagcaatgagattgacagaatcaagaaagagaatgac
aacatgcagattgagctcaggcatctgaaaggggaggatatcacttctttgcatcaccaa
gagctgatggtcatagaggaagcccttgacaatggcctggccagcgttcgtgacaaaatg
atggagtactacaatatgaagaagacaaatgacgagattttggaagacatgaacaagcgc
ctgagattcttttggcaacaacaagagatggccatggaagagaatgtgagggagatggaa
aatccttaccatcaacagagggtgagggactacaattcccagatgcccttcgccttcagg
gtgcagccaattcagccaaatttgcaagagaggatgtaa
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