Manihot esculenta (cassava): 110610409
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Entry
110610409 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110610409
KO
K03504
DNA polymerase delta subunit 3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03030
DNA replication
mesc03410
Base excision repair
mesc03420
Nucleotide excision repair
mesc03430
Mismatch repair
mesc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110610409
03410 Base excision repair
110610409
03420 Nucleotide excision repair
110610409
03430 Mismatch repair
110610409
03440 Homologous recombination
110610409
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110610409
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesc03032
]
110610409
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110610409
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110610409
DNA replication proteins [BR:
mesc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
110610409
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
110610409
MMR (mismatch excision repair)
DNA polymerase delta complex
110610409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
110610409
NCBI-ProteinID:
XP_021606014
LinkDB
All DBs
Position
3:22251596..22257973
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AA seq
532 aa
AA seq
DB search
MAQIETLGVLEEIETLVSDKLQVVSYKWLSRNFLVSSNVAKRLLQEFVQKHTSGLEVVYT
LSGWLKNNPPSYHIMLVSGPKLEEAKQEFDGNCSLHVYSVQAAIPKDPAALWNDEFVQAE
ELFKQPSAFDNCLRDNRFCGILNPFVRRNVDGTPKNNAALQPKSVGILGPTKTNSAEKIV
VPPPQQVKVDQSGPKFGQQSTMLVKDVKKESPGTGVHYEASKPPLDKEKIPPPLANNEKK
SRSDKSSMGNGGSLASLWGRASAKSKLTSPPAGDNSLISDPAASAEAQICACEAIEDRSS
DDEAQNVNFRRASNVEGGRKRRVVLDYSDDEDEDAVSLASPDLPKGKFSKTPHPVKLNDN
DQTESKLKVKEGRSTDPTSDQVAREKSSSAQKSMKSKDSSKENILNHSNGGHVKTDVKAD
IANAAPNSPKRRKVLKTSIDERGREVTEVVWEGEETETKKADSSVMKKAQNSVAKKAETN
AVANTVNNRAAAVKKSAVGNTAPSNQGGKAGNKKGGSKDPKQGSLLSFFNKV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgaaaccctaggcgttcttgaagagatcgaaactctcgtctctgacaaa
cttcaagtggtttcatacaagtggctgagtcgcaattttctggtgtcatcaaatgttgca
aagaggttgcttcaagagtttgtgcagaaacatacaagtggtctggaagtagtatatact
ctgtctggctggttgaagaacaatcctccaagttaccatataatgcttgtttctgggccc
aaacttgaagaagctaaacaagaatttgatggcaattgctcacttcatgtctacagcgtg
caagctgcaattccaaaggatccagctgccctttggaacgatgaatttgtacaagcagaa
gagctcttcaagcagccctctgcatttgataattgtttgagagataacaggttttgtggg
attcttaatccctttgttaggcgcaatgttgatggaacacccaagaacaatgcagctctg
cagcccaaaagtgtgggaatcctaggaccaaccaagactaattctgctgaaaaaattgta
gttccacctcctcaacaagtgaaagttgatcaatcaggtccaaagttcggacaacaatct
accatgttggtgaaagatgtaaaaaaggaaagtcctgggacaggagttcattatgaggcc
tccaagccccctctagataaagaaaaaatccctcctccgttggctaataatgagaagaaa
agccggagcgataaaagttctatgggaaatggaggttcattagcaagtttgtggggtcgt
gcatcagctaagtcaaaactcacttcacctcctgcaggcgataacagtctcatttcagat
cccgctgccagtgcagaagctcaaatttgtgcttgtgaagcaatagaagatcggagcagc
gatgatgaggctcaaaacgtcaattttaggagagcctccaatgttgaaggtggtagaaaa
aggagggtagttcttgattattccgatgatgaggatgaagatgctgtgagcctagcatca
ccggatcttccaaaggggaaattcagtaagaccccccatcctgtgaaactcaatgacaac
gaccaaacagaaagcaaactgaaggtcaaggaaggaagatctactgaccctacctctgat
caagttgcaagggaaaagtcttcaagtgcccaaaagagtatgaagtctaaagactcctct
aaagagaatatcctgaaccatagtaatggtggtcatgttaaaacagatgttaaagcagat
attgctaatgctgctccaaattctcccaaaaggaggaaagtcttaaagacctccattgat
gagcgtggtagagaagtaactgaggtagtatgggagggggaagagacggaaacaaagaaa
gccgacagtagcgtgatgaagaaagctcaaaatagtgtggcgaagaaagctgaaactaat
gcagttgcaaatactgttaacaacagggcagctgcagttaagaagtctgcagtaggaaat
acagcaccatctaatcaaggaggcaaagcagggaacaaaaagggaggaagcaaggaccct
aaacaaggcagtcttctatctttcttcaataaggtgtaa
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