Manihot esculenta (cassava): 110610448
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Entry
110610448 CDS
T05761
Name
(RefSeq) importin-5 isoform X1
KO
K20222
importin-5
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110610448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110610448
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110610448
Pre-60S particles
110610448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
HEAT
Importin_rep_6
HEAT_2
HEAT_EF3_N
MMS19_C
TOR1L1_N
Cnd1
Vac14_Fab1_bd
DUF577
IFRD
Adaptin_N
Arm
Htt_N-HEAT_1
ParcG
CEP104-like_TOG
RIX1
ARM_ARMC5
IBN_N
HEAT_IPO9_c
TPR_TNPO3_IPO13_3rd
TPR_26
TPR_AP5Z1
Phasin_2
Motif
Other DBs
NCBI-GeneID:
110610448
NCBI-ProteinID:
XP_021606063
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All DBs
Position
3:complement(17717795..17729224)
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AA seq
1115 aa
AA seq
DB search
MDDSTQQLQQAQLAAILGQDPTPFEALISSLMSSSNEQRSQAELAFNLCKQTDPDSLSLK
LAHLLQFSSHAEARAMSAVLLRKLLTRDDAYLWPRLSLAAQSSIKSILLTCIQHEQTKSI
VKKLCDTVSELASGILPENGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSQYIGETLIP
FIKELHSVFLQCLGSSSNFDVKIAALNAVINFIQCLNSSSDRDRFQDLLPAMIRTLTEAL
NNGNEATAQEALELLIELAGSEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAIEFVIT
LAEARERAPGMMRKLPQFISRLFAILMRMLLDIEDDPAWHSAESEDEDAGETGNYSVGQE
CLDRLAISLGGNTIVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVV
SMVLNSFYDPHPRVRWAAINAIGQLSTDLGPDLQNQYHQRVLPALASAMDDFPNPRVQAH
AASAVLNFSENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQK
YYDAVMPYLKAILVNATDKSNRMLRAKSMECISLVGMAVGKDKFREDAKQVMEVLMSLQG
SQMEADDPTTSYMLQAWARLCKCLGQDFLPYMTVVMPPLLQSAQLKPDVTITSADSDNDI
DDSDDESMETITLGDKRIAIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVATTLVPL
LKFYFHEEVRKAAVSAMPELLRSAKLAVEKGLSQGRNESYVKQLSDYIIPALVEALHKEP
DTEICANMLDALNECLQISGPLVDEGQVKSIIDEIKQVITASSSRKRERAERAKAEDFDA
EEGELIKEENEQEEEVFDQVGEILGTLIKTFKASFLPFFDELSTYLTPMWGKDKTAEERR
IAICIFDDVAEQCHEAALKYYDTYLPFLLEACNDENPDVRQAAVYGLGVCAEFGVSVFKP
LVGEALSRLNVVIQHPNAKHPENVMAYDNAVSALGKICQFHRASIDSAQVVPAWLNCLPI
TGDLIEAKVVHEQLCLMVERSDSELLGPNNQYLPKIVSVFAEVVCGKDLATEQTASRMVN
LLRHLQQTLPPATLASTWSLLHPQQQMALQSILSS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcaactcagcagctccaacaagctcaactcgccgccatactcggccaggac
cctacccctttcgaagctctaatatcctctcttatgtcttcctccaacgagcaacgatca
caggcagagctcgctttcaacctctgcaagcagaccgatccggattctctctccctcaaa
cttgctcacctccttcagttctcttctcacgccgaggctcgcgctatgtccgccgtcctc
cttcgcaagcttcttacccgggatgatgcttatctctggcctcgtctctccctcgcagct
cagtcttctatcaaatctattctattgacttgtattcagcatgagcagaccaaatcgatt
gttaagaagctgtgtgatactgtttctgagcttgcttctggtattttgcctgagaacggc
tggcctgagcttttgccttttatgtttcagtgcgtttcttctgattcgccgaagttacag
gaatctgcgttcttgatatttgctcagttgtcacagtatattggcgagaccttaattccg
tttattaaggagctacactcggtgtttttacagtgcttgggatcgtcttcgaattttgat
gttaagattgcggctttgaatgcggttatcaattttatccagtgtttgaatagttcgtca
gatcgggataggtttcaggatttgttgccggcgatgataaggacgttgactgaagctttg
aataatggaaatgaggctacggcgcaggaggctttggagcttcttatcgagttggcaggt
tcagagccaaggtttctgcggcgacaattggtggatgtcgtcggttctatgttgcagatt
gctgaggctgagagtttagaagaaggcactcgacacttggctattgaatttgttattact
ttagctgaggctagggagagggcgccagggatgatgaggaagttgccacagtttattagc
aggttattcgccattttgatgagaatgttgttagatattgaggatgatcctgcatggcat
agtgcagaatctgaggatgaagatgcgggagagaccggtaactatagtgttggacaggag
tgcttggataggttggccatttcattgggtgggaatactattgttccagtcgcttctgag
cagttgcctgcgtatttagctgctccagaatggcagaagcaccatgctgccctcattgct
cttgctcaaattgctgagggttgctccaaggtaatgataaaaaatctggaacaagtagtg
tcaatggttctaaactcattctatgatccccatcctcgtgtgagatgggcagctattaat
gcaattggacagttgtctactgatcttggtccagatttgcaaaatcaatatcatcagaga
gtgttgccagcacttgctagcgcaatggatgattttcccaaccctcgagtgcaggcacat
gctgcttcagcagtgctcaacttcagtgagaactgtactccagagattttaactccttac
ttggatggaatagtgagcaaattgcttgtactattgcagaatggaaaacaaatggtgcaa
gagggagccttgactgccttggcctcagttgctgactcatcccaggagcacttccaaaaa
tattatgatgcagtaatgccttacttgaaggctatattagtgaatgcaacagacaaatct
aaccgcatgcttcgtgccaaatcgatggagtgcattagtctggtagggatggcagttggg
aaggataaatttagagaggatgctaagcaggttatggaagtccttatgtctttacaagga
tctcaaatggaggcagatgatccgacgacaagttacatgttacaagcatgggccagactt
tgcaagtgtttgggacaagattttcttccttatatgactgttgtaatgccacctttgctt
cagtctgctcaacttaagccagatgtaacaattacatctgcggattcagataatgatatt
gatgattcagatgatgaaagtatggagactatcacccttggggacaaaagaattgcgatc
aagactagtgtcctggaagaaaaagcaactgcatgtaatatgttatgttgctatgcagat
gaacttaaggaaggcttctttccatggattgatcaggttgctacaacccttgttcctctt
ttgaaattttatttccatgaagaagttaggaaagcagctgtttctgccatgccggagcta
ttgcggtctgccaaattagctgtagagaaggggttgtctcaaggtcgcaatgagtcttat
gtaaagcagttgtctgactatattattccagcattggtggaagcattgcataaggaacct
gatactgagatttgtgcaaatatgttagatgcattaaatgaatgcttacagatatctgga
ccccttgttgatgaaggtcaagtgaaatccatcatagatgagataaaacaggtgatcaca
gctagttctagtaggaaaagagagagagccgagagagccaaagctgaagactttgatgcc
gaggagggagagttgattaaagaggaaaatgagcaagaggaggaagtttttgaccaagtg
ggtgagatcttgggaacgttgataaaaacatttaaagcctctttcttgcctttctttgat
gagctatcaacctatctaactcctatgtggggcaaggataagactgctgaggagagaaga
attgccatttgcatttttgatgatgttgcagagcaatgtcacgaggcagcacttaaatac
tatgatacatatctcccattcctattagaggcatgcaatgatgagaatcctgatgttcga
caggcagctgtatatggacttggagtttgtgcagagtttggtgtatctgtatttaaacct
cttgttggagaggctctttcaagactaaatgttgtgatacaacatcctaatgccaagcat
cctgaaaatgtgatggcatatgataatgctgtttctgctttggggaaaatttgccagttc
catcgtgcaagtattgattcagctcaggttgtcccagcatggttgaactgtttgccgata
acaggtgatttaattgaagcaaaagttgttcatgagcagctttgtttgatggtggagcgg
tcggactcggagcttttgggtcccaacaatcagtatttacctaagattgtttcagtattt
gctgaggttgtatgtggcaaggacctggcgacagaacaaactgcaagccgaatggttaac
ttattgaggcaccttcagcagactttaccaccagcaacattggcttcaacttggtctttg
ctgcatccacagcaacaaatggcactgcaatccattttgtcatcatag
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