Manihot esculenta (cassava): 110610476
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Entry
110610476 CDS
T05761
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110610476
Enzymes [BR:
mesc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110610476
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110610476
NCBI-ProteinID:
XP_021606103
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Position
3:28053999..28058089
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AA seq
448 aa
AA seq
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MAVPSKRVCVFAAVLVVMFVGVLATVQNDGISGVTRKEETEKLQTSKNSSMAASSGEEIE
AWKNEHAVDDPEEVVALVQMGIRNSTQRRRLGYFSCGTGNPIDDCWRCDPNWQKNRKRLA
ECGIGFGRNAIGGRDGRFYVVTDPNDDDPVNPKPGTLRHAVIQDEPLWIVFKRDMVIQLK
QELIMNSFKTIDGRGVNVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYG
WRTMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGH
SDSYTRDKQMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYNAPANPFAKEVTKRVETSTGIWKNWNWRSEGDLLLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGAITANAGALPCRRGRQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaccttccaagcgggtttgtgtttttgcggcggtgcttgtggttatgttcgtc
ggagttttagccaccgttcagaacgacgggatctctggtgttaccaggaaagaagaaaca
gagaagttgcagacctccaagaactcatcaatggctgcaagttctggagaagagattgag
gcctggaaaaatgaacacgcagttgatgacccagaagaagtggttgcattggtccaaatg
ggcattcgcaacagtactcaaaggaggcgacttggctatttctcatgtggaactggcaat
cccattgatgattgctggcgctgcgaccccaattggcagaaaaaccgcaagcgccttgct
gaatgtggaattggttttggcagaaacgccattggaggccgcgatggtcgcttctatgta
gttacagatcccaatgatgacgaccctgtcaacccaaagcctggaactttgcgtcacgct
gtaatccaggatgaaccattgtggattgtgttcaaaagggacatggtgattcaattgaag
caggaactcatcatgaacagttttaaaacaattgatggccgtggggttaacgtccatatt
gctaatggagcctgcatcaccatccaatttgttacgaatgtaatcattcacggtctccac
attcatgactgcaagcccactggtaatgctatggttaggagctcacccagtcactacggg
tggaggacaatggccgatggagatgctatctctatttttggatcaagccacatatgggtc
gaccacaattccctttctcattgcgctgatggcctggttgatgctgtcatgggttccaca
gccattaccatctccaacaaccacttcactcatcacaatgaggtgatactgttgggacac
agtgattcctacacaagagacaagcaaatgcaagtgaccatcgcttttaaccattttggg
gaaggacttatccagagaatgccaaggtgtagacacggatacttccacgtagtcaacaac
gactatactcactgggagatgtatgccattggtggaagtgcaaatcccaccattaatagc
cagggcaacagatacaatgcaccagctaatccttttgcaaaggaggtgacaaagagggtg
gaaacaagtacaggcatatggaagaactggaattggaggtcagagggtgaccttctgctg
aatggcgcttatttcactccatctggagctggagcttcagctagctatgctcgtgcttca
agcttaggtgccaagtcttcttccatggttggagcaattactgctaacgcaggtgctctt
ccatgccgcaggggacgccaatgctaa
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