Manihot esculenta (cassava): 110610620
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Entry
110610620 CDS
T05761
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 11, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00900
Terpenoid backbone biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110610620
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mesc01006
]
110610620
Enzymes [BR:
mesc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110610620
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110610620
2.5.1.29 geranylgeranyl diphosphate synthase
110610620
Prenyltransferases [BR:
mesc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110610620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7114
Motif
Other DBs
NCBI-GeneID:
110610620
NCBI-ProteinID:
XP_021606317
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All DBs
Position
3:complement(25679734..25680735)
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AA seq
296 aa
AA seq
DB search
MAGVLSSAVHGNPIARIVSGSNPNRPLFFHRPLAVAVSTTHQSYWSSVNADIDAHLNKSI
PSKPPLVVFEPMRHLTFSAPQTTAPALCIAACELVGGHRDQAIAAASALHLMHASAFTHE
NLPLTERPKPTFDHTYGPNIRLLMADGMIAFGFELLARADNNSNRVLRAIIEISRAMGTQ
GVMAGQYNESQLGESDGTEAFHVGWLHNVCSKKGGVLHACAGACGATLGGGSEEEIEKLR
RYGLYVGTIQGILNRVEKNEWSIKEVKELRVLGLRELKDFNQEKVRTISSLVETYF
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggccggggttctctcttccgccgtacatggcaatcccatagctcgtattgtctccggt
tccaaccccaaccgtccattattttttcatagacccttggcggttgctgtgtctactact
caccagtcttattggagctccgtaaatgctgacattgacgcccatctcaacaagtcaatt
ccctcaaaaccaccgctggttgtcttcgagcccatgcgtcatttgaccttctccgcccca
caaaccaccgcacccgccttgtgtatcgccgcttgtgagctcgttggtggccaccgggac
caagccattgctgcagcatctgctttgcatcttatgcatgcttccgctttcactcatgag
aacctccctttgacggagaggcccaagcccacttttgaccatacctatggccccaacatt
agacttctaatggcagatggaatgatagcattcgggtttgagttactggctcgggccgac
aacaattcgaatcgggttttgcgtgcaatcatcgagatctcacgtgccatgggtacacaa
ggggtgatggcagggcaatataatgagtcacaacttggagaatcggacgggacggaagct
ttccacgtgggatggctacataatgtatgtagcaaaaagggaggtgtattgcacgcgtgt
gcaggtgcgtgtggggcaacattaggaggtggaagcgaggaggagattgaaaaattgaga
aggtatggcttatatgtggggacgatacaagggatccttaatagggtagaaaaaaatgag
tggtcaataaaagaggtgaaagagttgagagttttgggtcttagagaattgaaagatttc
aatcaagaaaaggttagaacaatttctagcctcgttgaaacctacttttga
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