Manihot esculenta (cassava): 110610639
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Entry
110610639 CDS
T05761
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110610639
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
110610639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
110610639
NCBI-ProteinID:
XP_021606387
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Position
1:34328013..34335955
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AA seq
632 aa
AA seq
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MGVEMAYQYNGEFQEMEDVNFSDSELVCHVRDALISVQTGDSDSYHQLVGVMHHSERLAP
DEVALLVTSLKALSGAVSYIDNVHHDSLLNSIFGMSLWKYGPDVMDALLELIIALAASNG
KYVDSCLDMLVSNFMPPMYLVYTLKQPRGQAKKEQVLSRVHTALEDIVDLIPMAASRLSS
VVVHRMPTTFKKDLEKDHLMYRTEIYVENILRLESGAIREFVGSRMLMAVVDLLTELDVA
IGWDDILRDDSCKGIFAIELEDADEVDDDENDYGELPRTLNHKSLGKNIVADLLDSLMVL
TFEHLESCANNKRLGEVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPEKCGVKFAKT
LADRFSCSDNPVTRMSAVAYLASYLARAKFLSPAFVASTLKRLVDWCLEYCETQGSDMNP
KAHRVFYSGCQAIMYVLCFRMKSLMDVPRFKSQLLLMPLEPVLKHKLDPLKVCLPSIVEE
FLKQAKAAYLFTTSETFIFEDMLESDFSKDFGGLERLDMFFPFDPCLLKKSDRGYIRPNF
VYWKHVRTTYGSDEDDSSDADIAEDFVAENGESSMEEGRTGSLDEQYLELDEFDHAMNKM
SITPKNGFTYRFGGEQMKMPSRIRPSTTPESL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggaaatggcttatcaatataacggagagtttcaagaaatggaggatgtcaat
ttcagtgattctgagctggtttgtcatgtcagagatgctcttatctctgtgcaaacggga
gacagtgacagttatcatcagcttgttggtgtcatgcatcattcagaacgccttgcccct
gatgaggtggcccttcttgtgacaagtctaaaggcgttatctggggcagtttcttatatt
gacaatgttcatcatgattcccttcttaattctatttttggaatgagcttgtggaagtat
ggacctgatgtgatggatgctttgcttgagctgattattgccttggctgcttcaaacgga
aaatatgttgattcatgcttggatatgcttgtaagcaatttcatgccaccaatgtattta
gtatatacactaaagcagccgcgtggtcaggccaaaaaggaacaagttctttcccgggta
catacagctttggaagatattgttgacttgatacctatggcagcctcaagattatcatca
gtagttgtgcacaggatgccaacaacctttaagaaggatctcgagaaggatcatctgatg
tatcgaactgagatctatgtggagaacattttaagattagagagtggtgcaatcagagaa
tttgttggaagcaggatgcttatggctgtggttgatttgctgactgagttggatgttgct
attggttgggatgacattctacgagatgactcttgtaaaggcatttttgcaattgagcta
gaagatgcagatgaggttgatgatgatgagaatgattatggcgagcttccaagaacttta
aatcataagagtttaggtaaaaacattgttgctgatctattagatagcttgatggtgcta
acttttgagcatcttgaatcgtgtgcaaacaataaacgtttgggtgaggtgtttgaaact
cttctggattccttcatgctaactattctaaacacatataaatcaaagtttgctcagttt
gtcatgttctatgcctgtgctctggatcctgaaaaatgtggtgtgaaatttgccaaaaca
cttgcagataggtttagctgcagtgacaatccagttaccaggatgagtgctgtggcttat
cttgctagttacttggctcgtgcaaagtttttgtctcctgcttttgttgctagcacattg
aaaaggctggtggactggtgtttagaatattgtgaaactcagggtagtgacatgaaccca
aaagcacatcgagttttctactctggatgtcaggccataatgtatgtgctctgctttcgt
atgaagtcgcttatggatgttcctaggttcaaatctcagcttctgctcatgcctctagag
cctgttttgaagcataaattggatcctcttaaggtttgcctgccatccatagtagaagag
tttctcaaacaggcaaaagctgcttatttgttcaccacatctgaaacattcatttttgaa
gatatgttagaatcggatttttctaaggactttggtggactggagagactggacatgttc
ttcccatttgacccatgtttgctgaaaaaaagtgacagaggttacatacggccaaatttc
gtgtactggaagcatgtcagaactacttatggtagtgatgaggacgatagcagcgatgca
gatattgctgaggattttgttgcagagaatggggagagttccatggaagaaggaaggaca
ggaagtttagatgagcaatatcttgagcttgatgaatttgaccatgcaatgaacaagatg
tcaatcactcctaagaatgggttcacttatagatttggaggtgaacaaatgaaaatgccc
tcaagaataagaccctctacgactcctgaatctttgtga
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