Manihot esculenta (cassava): 110610721
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Entry
110610721 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110610721 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110610721
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110610721
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110610721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_10
zf-Nse
RING_XB3-XBAT31
Sina_RING
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110610721
NCBI-ProteinID:
XP_021606465
LinkDB
All DBs
Position
3:complement(27300919..27304431)
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AA seq
296 aa
AA seq
DB search
MIDLRHFQAGKTSSCDRKRRKKKEIARKRRSNQNWRQMKQERNRRLGSSFRRVAEYHLQV
LILSSGLFVLCHMDSWGLNCIEGNMTNSQRRGLDLDLDLNYPIAPQIRALDLSLGLSIYA
NSEEVQAQVHGWSHRQTTNVIEVLDDEVAIISPRAFSRARENSERNHSHGMREVIGEATG
AVTGCTAVTTLCTNCKRRIPDDCEPCLNPGTSNKKKANNVSLMEDVLQPVSMPDESIFSC
PVCMGPFIEPTATRCGHIFCKECLLKSLKSLHNKCPTCRQKVGKRGIFRVYLPTNN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatagatctaaggcattttcaagctggaaagacatcctcgtgtgatcggaagcgaaga
aagaagaaagaaatcgcaaggaaacggcgaagcaatcaaaattggcggcagatgaagcaa
gaaagaaaccgccgattaggttcgtccttccgtcgcgtcgcagaatatcatctccaggtc
ttgattctctcctcaggtttgtttgtgctttgtcacatggattcatggggactgaactgt
atagaagggaacatgacaaactctcaaagaagaggattggatctagacttagatcttaac
tatcctattgctccacaaattagggctcttgacctgtctcttggtttgtccatttatgct
aattctgaagaagttcaagctcaggtgcatggatggtctcaccgtcaaactacaaatgtc
atagaggtccttgacgatgaagttgctataatctccccaagggccttttctcgagctagg
gaaaattctgaaagaaaccattctcatgggatgcgtgaagtaattggtgaagctactgga
gctgttacaggatgcacagctgttaccactttatgcaccaactgcaaaagaagaatacct
gatgattgcgagccttgcttgaatccaggaacaagtaacaagaagaaggcaaataatgtt
tctttgatggaagatgtgctccagcctgtttctatgcctgatgaatctatcttcagttgc
cctgtatgcatgggcccctttattgaaccaactgcaacaaggtgtggccacatattctgt
aaggagtgcctcttgaaatcattaaaatcattacataacaaatgcccaacctgcaggcag
aaggttggcaagcgaggcatctttagggtttaccttcccaccaacaactga
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