Manihot esculenta (cassava): 110610852
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Entry
110610852 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RNF144A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110610852
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
110610852
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
110610852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-RING_5
zf-C3HC4
zf-RING_2
IBR_1
zf-C3HC4_2
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
110610852
NCBI-ProteinID:
XP_021606619
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All DBs
Position
3:3948481..3951881
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AA seq
383 aa
AA seq
DB search
MEIQQIAVCLESQCIPMSQEQEQQEQGKEEPRKKPKVEKPEMIEIVNLDDDADDGFFYAP
ISIKGNTKRTAISVEQYSEEMELNLAILASLKPTTKTNKQEYFVHLSYGIHDYYYVDDVD
GGVDDDIKVLYFRPRSSTSKVGRKRFKNSMSESGQSSKPKRDPEFVCEICVEPKTVDESF
NIKGCTHAYCRECMAKYVATKLQDNISNIHCPVSGCSGLLEPEYCRSILPEEVFDRWGNA
LCEALIIGCQKFYCPFKDCSAMLIDDGGEIIKESECPNCCRMFCAQCKVPWHSGIQCQEF
QELHKDEREKEDIMLMRLAENKHWRRCPNCRIYVERTQGCRYMKCRCGAAFCYSCGFAKG
VVKFHACASTGSIKPCICEKSGN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaacagattgctgtttgcttagaatcccagtgtataccaatgtcgcaagaa
caagaacaacaagaacaggggaaggaagaaccaagaaagaagccaaaagtggagaaacca
gagatgattgagattgtgaatctagatgatgatgctgatgatggatttttctacgcaccc
atctcaataaaaggtaacacgaagagaactgcaatatctgttgagcaatacagtgaagaa
atggaacttaaccttgctattttggcttcccttaaacccactaccaaaaccaacaagcaa
gaatatttcgtccatctttcatatggtattcatgattattactatgtggatgatgttgat
ggtggtgttgatgatgatattaaggtactttacttcagaccccgatcctccacttctaag
gtaggaagaaaacgctttaaaaattccatgagcgaaagcggacaatcttcgaaacccaaa
agggatcctgagttcgtctgtgagatatgcgttgaacccaagactgtagatgaatcattt
aacatcaagggttgcactcatgcttactgtagagagtgcatggccaagtacgtggccacg
aaattgcaagacaatatatctaatattcattgtccagtatcaggttgttcaggcttgttg
gagcctgagtattgccgttcaatccttccggaggaagtttttgataggtggggcaatgct
ttgtgtgaagctttaattattgggtgtcagaaattctattgtccctttaaggattgttca
gcaatgttgatagatgatggaggagagatcataaaggaatctgagtgtcctaattgctgc
agaatgttctgtgcacaatgcaaggtcccttggcattcagggattcagtgccaggagttt
caggaattgcataaggatgagagagagaaggaagatatcatgttgatgaggctagcagag
aataagcattggaggaggtgcccaaattgtaggatatatgtcgagagaacacagggttgc
agatatatgaaatgcaggtgtggagctgctttctgttacagctgtggatttgctaagggt
gtggtgaaatttcatgcttgtgcttcaactggctcaattaagccctgcatatgtgagaaa
tctggcaattaa
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