Manihot esculenta (cassava): 110610875
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Entry
110610875 CDS
T05761
Name
(RefSeq) flowering time control protein FCA
KO
K13207
CUG-BP- and ETR3-like factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110610875
Spliceosome [BR:
mesc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110610875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
WW
RRM_occluded
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
110610875
NCBI-ProteinID:
XP_043818179
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Position
1:complement(39472684..39481731)
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AA seq
621 aa
AA seq
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MERQREDHHHHPPPPPPPPPPPPPPPPHPHPHPHPHPHPHLHPHPHPHPHPHPHPYHHPH
PHPHPHPPPHPHPHPHPLPHRHHRNNQPDHPEHFPQYYQQEHQHHHFNGHESLAEQNQDL
QFNNHDKHYNYDTNYQMSFEPNESYGGGGGGGFCSNARKRGRYHSGRAGSPDHNDEAVNA
KLYVAPVPRTTTEEYIRPLFEGHGNVVEVIFPKDKRTGQQQGYCFVKYATIEEADRAIRA
LNDQHTVPGEAAPIKVRYADGERERLGKVERGRLVKGEREHPGGGEFVDKLYVGSINKQA
SKQEIEEIFSPYGHVEDVYIARDVLKQSRGCAFIKFSHRDMAVAAIKALNGTFTMRGCDL
PLVVRFADPKKRKTGELRGNYASGGQNFCPGYHEPMIRPAPNFGDSMGGCVLPNASYCVQ
EISSNSQPQTVSHAVELTHGAPHITEPSLPAVKQPPTQLCQMPLQQTQVPQQCLQSSQQA
VSEMMKQSPNLEQHQGVQINPESAGNENNPPAVNVTSAALAVPPSTLTVDPLECDWSEHS
CPDGYKYYYNCTTCESRWEKPDEFISYQLQLQKRQKPNNSSQQLHSLSTSLCGEEVGKMQ
KDLGHVQIKSDTSPVVDPTCV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacagagagaggatcaccaccaccacccccctccgcctccgcctccccctccc
cctccccctccccctccccctcatcctcatcctcatcctcatcctcaccctcaccctcac
cttcaccctcaccctcaccctcaccctcaccctcaccctcacccttaccatcaccctcac
cctcaccctcaccctcatccgcctccccaccctcaccctcaccctcaccctctccctcac
cgccaccaccgcaataaccagccggaccaccccgagcattttccgcagtattaccaacag
gagcaccagcatcaccactttaacggccacgaatctcttgccgagcagaatcaggacctc
caatttaacaaccacgacaagcattataattacgacactaactaccaaatgagcttcgaa
ccaaatgaatcatatggtggaggaggtggcggaggattctgttccaatgcccgcaaaaga
ggccgataccattctggccgagcaggttcgccagatcataacgatgaagctgttaatgca
aaactttatgttgcaccggttccaagaactacaacggaagaatatatccgccccttgttt
gaaggacatggaaatgttgttgaggtgattttccccaaggataagcggactggccaacaa
caagggtattgcttcgtgaaatatgcaacaatagaggaagctgacagggctattagagct
ttaaatgaccaacatactgttcctggggaggcagctcccattaaggtcagatatgctgat
ggggaacgggaacgtcttggtaaggttgaaagaggacgtcttgttaagggggaaagggaa
cacccagggggaggggaatttgtggacaaactctatgttggttccattaacaagcaagct
tcaaaacaggaaattgaagagatattttctccatatggtcatgtggaagatgtctacatt
gctcgtgacgtgttgaagcaaagtcgtggatgtgcatttattaaattttctcaccgagat
atggcagtggcagcaatcaaagctttaaatggaactttcacaatgcgaggttgtgacctg
ccgttggttgttcgctttgcggatcccaaaaagcgtaaaactggagagctaaggggaaat
tatgcatctggtggacaaaacttctgtccaggttatcatgaaccaatgattaggccagcc
cctaattttggtgattccatgggaggttgtgttttgcctaatgcttcatactgtgtgcaa
gaaatttcctcaaattcacagccacaaactgtttcccatgctgtagaactcactcatgga
gctcctcatatcacagaaccatctcttcctgcagtaaagcagccgcccacacagttgtgc
cagatgccattacaacaaacacaagttccacagcaatgtttgcaatcatctcaacaagcc
gtctctgagatgatgaaacagtctccaaatttagagcagcatcaaggtgtgcaaattaac
cctgagtctgctgggaatgaaaacaaccctcctgcagtgaatgttacttctgctgctctt
gcagtacctccaagtaccctgacagtggatccactagagtgtgattggagtgagcattcc
tgccctgatgggtacaagtactattataattgcacaacctgtgaaagtagatgggagaaa
cctgatgagttcatctcataccagctacaattgcaaaagaggcaaaaaccaaacaattct
agccagcaacttcattccttatcaacaagtctttgtggtgaagaagtgggtaaaatgcaa
aaggacctgggtcatgtgcaaataaagtcagacactagtccagttgttgatcctacctgt
gtctag
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