Manihot esculenta (cassava): 110610958
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Entry
110610958 CDS
T05761
Name
(RefSeq) transcription factor FAMA isoform X1
KO
K26213
transcription factor FAMA
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110610958
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110610958
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
110610958
NCBI-ProteinID:
XP_021606729
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Position
3:complement(27565687..27567666)
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AA seq
400 aa
AA seq
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MDKEDNFSVNYTALDYTLDHHNHQQQDQEFTKSRISEASGDNSNGMIDYMLNNPHPHQQQ
LSSGFCTSTSLDKLSFADVMQFADFGPKLALNQTRISEEETGIDPVYFLKFPVLNDKREG
QSLMVPQLSGENKAGIMGEDRAVREEEEARVSDNTSVQLQFLGDQDLQNKNPIPEAKNKR
KRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE
FVRELEHLLQCLESQKRRRLYGEGSRQMGDSSLAIQQPQPPFFPPLPLQNDQMKLVDFET
ELREETAENKSCLADVEVKVLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTI
EQTVLYSFNVKIASESRFTAEDIASSVQQIFSFIHANSSM
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaggacaacttctcggtaaactatacggctttagattacactctagaccac
cataatcatcagcaacaagatcaagaattcactaagtcgcgaattagtgaagcttctggc
gataacagcaacgggatgatcgattatatgctcaataatcctcatcctcatcagcagcaa
ctatcttctgggttttgcacttcaacttctcttgataaactgagtttcgcagatgttatg
caatttgcagattttgggccgaagttggcgttaaatcaaacgagaatatctgaggaagaa
actggtattgatccagtttacttcctgaagtttcctgtattgaacgataagagggaggga
cagtctctaatggttcctcaactaagtggggaaaataaagcaggaatcatgggagaagat
agggctgttagagaggaagaagaagctagggtttcagacaatacgtcggtgcaactccag
tttcttggagatcaagatcttcaaaacaagaacccaatacctgaggcgaagaacaagaga
aaaaggccaagaactatcaagacaagcgaggaagtggaaagccaaagaatgactcatatt
gcagtggaaagaaatcgaaggaagcaaatgaatgaacatctccgagttctgaggtctctc
atgccgggatcttacgtacaaaggggagaccaagcttcgattattggcggagccattgag
ttcgtgagggaattggagcacctccttcaatgcctagaatctcaaaagcggcgaaggctc
tatggagaaggttcaaggcagatgggagattcgtctcttgcaatccagcaacctcaacct
ccatttttccctcctttgcctcttcaaaatgatcaaatgaaactcgtggacttcgaaacc
gagctccgagaggaaactgctgagaacaagtcatgcttggctgatgttgaggtgaaggtt
ttagggtttgatgctatgatcaagattctatctaggagaaggccaggtcagctcattaag
acaattgcagctctagaagatttgcaacttaatatcctccacaccaacattactaccatt
gaacaaactgttctctattcattcaatgtcaagattgcaagcgaatctaggttcacagca
gaagatattgcaagctcggttcaacagatattcagttttatccatgcaaacagcagcatg
tga
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