Manihot esculenta (cassava): 110611080
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Entry
110611080 CDS
T05761
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110611080
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
110611080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Helo_like_N
TMPIT
GCIP_C
IL11
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
110611080
NCBI-ProteinID:
XP_021606884
LinkDB
All DBs
Position
3:complement(32662625..32667684)
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AA seq
269 aa
AA seq
DB search
MASDLHMTPQLEQIHGEIKDNFRALSNGFQRLDKIKDSNRQSKQLEELTGKMRECKRLIK
EFDREIKDEEIKNPPELNKQLNDEKQSMIKELNSYVALRKTFMNSLGNKRVELFDMGAGG
SEPIAEENVQMASAMSNQELIDAGMKTMDETDQVIERSKKVVEQTIEVGTQTAVTLKGQT
EQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPN
NKDIRDIPGLAPPAPSRRLLYLRDPGRVA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggacttgcacatgacccctcagttggagcagatccatggtgaaattaaggac
aattttcgagctctctcaaatgggttccagaggctggataaaatcaaagattccaacaga
caaagtaaacagcttgaggaacttactgggaagatgagggagtgtaaaagattgattaaa
gaatttgatcgtgaaattaaagatgaggagatcaaaaatcctcctgaactaaataagcaa
ctcaatgatgagaagcaatccatgataaaagagctgaattcctatgtcgctctgaggaaa
acttttatgaatagccttggtaacaaaagagttgaactttttgacatgggagcagggggc
agtgaacctatagctgaagaaaatgttcaaatggcatcagctatgtcaaatcaagaactc
attgatgctggtatgaagacaatggatgaaactgatcaagtcattgaacgatctaaaaag
gttgttgaacaaacaattgaagtgggaactcaaactgctgttaccttaaaaggccaaact
gaacaaatgggtcgaattgtaaatgagctggatacaattcagttctcaattaagaaggcc
tcacagctggtgaaggaaattgggaggcaggtggcgacagataaatgtataatgctattt
ctttttctcattgtatgtggtgtgatagccatcattgttgttaagatcgtcaaccccaac
aacaaagatatcagagacattcctgggttggcacctccagccccttcaaggaggctgttg
tatctaagggatccaggacgtgttgcttag
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