Manihot esculenta (cassava): 110611202
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Entry
110611202 CDS
T05761
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110611202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110611202
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110611202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
110611202
NCBI-ProteinID:
XP_021607070
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Position
3:complement(1604565..1616274)
Genome browser
AA seq
1092 aa
AA seq
DB search
MQRQKSILSFFQKPSPANQNSGHRDRLDGPKAHLLAKRQKQEITSSSEPEIRSHGSLQSS
LEVGGIDTPPEKVPRKILAESFKPNEDNCGSSLFSSIKHKFVKVDDKEKPLERFIDPEGL
TKQGAAPQHPEKDNAFCVNGAVDNGSILLAKSNGDVPGPETPGVQPLVPRLKRIQEDGSK
FDGKNGCSLLNAGKRVKLLLDSTAPSKKHDGLSDSTIKFEWLDPSKIRDANGRRPSDPLY
DKRTLHIPPDALKKMSASQKQYWSVKSQNMDVVLFFKVGKFYELYELDAEIGHKELDWKI
TLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRIEQLETSDQAKARGANSVIQRKLVQV
VTPSTATDGNIGPDAVHLLAIKEGNYGLDNGATVYGFAFVDCAALKFWVGSFNDDTSSAA
LGALLMQVSPREVIFESRGMSKEAQKALKKYSLTGSTTLQLTPVPPTSDFLDASEVRNLI
QSKGYLRGSSSPWNSALDSVTNHDIALCALGGLIDHLSRLMLDDVLRNGDIFPYQVYRGC
LRMDGQTLINLEIFNNSADGGVSGTLFNYLDNCVTSSGKRLLRKWICHPLKCVEGINNRL
NVVEDLMKQSEIMSIITQHLRKLPDIERMLGRVKASFQASASLVLPFIGKKVLKQRVKVF
GSLVKGLQIGMDLLVLLQEEGKIFSSLSKNFSLPELSGSAGLGKFLSQFEAAVDSEFPNY
QNHDVTESEAETLCVLIELFIKKATQWSEVIHAINCIDVLRSFAITASMSSGSMSRPVIL
LESKTAAFTQETRGPVLKIKGLWHPFALGENGGLPVPNDLHLGEDSDGYHPRTLLLTGPN
MGGKSTLLRATCLAVILAQLGCFVPSEKCVLSVVDVIFTRLGATDRIMTGESTFFIECTE
TASVLQNATLDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEF
TSHPHVTLQHMACAFKSRSESYSKGDQDLVFLYRLASGACPESYGLQVAVMAGIPEMVVE
AASQAGQLMKKSIGESFKSSEKRSEFSTLHEDWLKTLVSVSQIGNCNFENDDVYDTLFCL
WHELKSSYQSCN
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacagaaatcgatactctcattcttccaaaaaccctcgccggcgaatcagaac
tccggccacagggaccgtctcgacggtccgaaagctcatttactggcaaagcggcagaaa
caagagatcacctcttcgagtgaacctgagattcgcagtcatggttcactgcaatcgtcc
ctggaagttgggggaatcgataccccaccagagaaggtgccacgtaagattcttgctgag
agcttcaagcctaatgaggacaactgtggttcttcacttttctcgagcattaagcataag
ttcgtaaaggtcgatgacaaagaaaagcctcttgagagatttattgatccagaagggctc
accaaacaaggagcagctcctcaacatcctgaaaaggacaatgctttctgcgtgaatggg
gcagttgataatggaagtatcttacttgccaaaagcaatggtgacgttcctgggccagag
acaccaggtgtgcaacctttagttcctcgtttgaagcgaattcaagaggatggttctaag
tttgatgggaagaatggttgttccttgttaaatgctggcaagagagtgaaacttcttctt
gattcaacggcccctagcaagaaacatgatggattatctgattcaactatcaaatttgag
tggcttgacccttcgaaaattagggatgctaatgggaggaggcccagtgatcctctgtat
gataaaaggacactacatataccacctgatgctttaaagaaaatgtcagcatctcaaaaa
caatactggagtgtcaaatctcagaacatggatgttgtccttttctttaaagtgggaaaa
ttctatgagctttatgagctggatgctgaaattggtcacaaggagctggattggaaaata
acgttaagtggtgtggggaagtgtcggcaggttggtatatctgaaagtgggattgatgat
gctgttgaaaagctggttgcccgtgggtacaaagttggacgaatagagcagttggaaacg
tctgatcaagcaaaagctaggggtgcaaattctgtaattcaaagaaaattagttcaagtt
gtgacaccatctactgcaacagatggtaatattgggcctgatgcagttcatcttcttgct
ataaaagagggaaattatgggctagataatggggcaactgtttatggatttgcttttgtt
gattgtgctgctctaaaattttgggttggttctttcaatgacgatacttcctcggctgct
ttgggggcattactaatgcaggtgtcacctagggaagttatatttgaaagcagagggatg
tccaaagaagcacaaaaagcactaaaaaagtattcattaactggttcaacaacactgcaa
ttgacaccagttccacccaccagtgattttctggatgcttctgaagttagaaatttgatt
cagtccaagggttaccttagagggtcttctagcccatggaatagtgcacttgacagtgta
acgaaccatgatatagccctatgtgctcttggtggacttattgatcatctatccaggttg
atgttagacgatgttttgcggaatggggatatttttccctaccaagtttatagaggttgc
ctcagaatggatggacagactttgattaatcttgaaattttcaataatagtgctgatggt
ggtgtgtcaggtacattgtttaactatcttgataactgtgtgacatcatctggtaagcgg
cttttaaggaagtggatctgccatccactaaaatgtgttgaaggcattaataataggctt
aatgtagtcgaggatctaatgaaacagtcagaaattatgtcaattatcacacaacatcta
cgcaagcttccagatatagaaaggatgcttggtcgagtcaaggctagctttcaggcatca
gcttctcttgtactgccctttattgggaaaaaagtgttgaaacagcgagtgaaagttttt
ggatctttggtgaaaggacttcagattggaatggacttgttagtgctcttacaggaggaa
ggcaaaatattctcatcattatcaaaaaatttttcacttccagagctaagtggaagtgct
gggcttggcaaattcctctcccaatttgaagcagctgtagatagtgagttccctaattac
cagaaccatgatgtgacagagtcagaggctgaaacactgtgtgtgctgattgaattattt
attaagaaagctacacaatggtctgaagtgatccatgctatcaattgtattgatgtacta
agatcttttgcaatcactgcaagcatgtcatctggatctatgtccaggcctgttattttg
cttgagtcaaaaactgctgccttcacgcaagaaaccagaggacctgtacttaaaattaaa
ggtctgtggcatccatttgctcttggagagaatggaggactgcctgtcccaaacgacttg
caccttggtgaggattcagatggttatcatcctcgcactttgctgctgactggaccaaat
atgggtggaaaatcaacccttttgcgtgcgacatgtctggctgttatactggctcagctt
ggttgttttgtgccgagtgagaagtgtgttctctctgttgttgatgtcatcttcacacgg
cttggtgccactgatcgaattatgacaggcgaaagtacattcttcattgaatgcacagaa
acagcttctgttcttcaaaatgcgacactagattctcttgttattcttgatgaactaggt
cgaggaacaagcacttttgatggatatgccatcgcatatgcagtgtttcgacatcttgtt
gagaaggtaaactgccgattgctttttgcaacacactatcatccgctcacaaaggaattt
acgtctcatccacatgttacactgcaacacatggcctgtgctttcaagtcaagatctgaa
agctattccaaaggtgatcaggatttggtttttctgtatcggcttgcctctggagcatgc
cctgagagttatggattacaagtggccgtcatggctggaatccctgaaatggtggtggaa
gctgcttcacaggctggccaattgatgaaaaaatcaattggagaaagtttcaagtcaagt
gaaaagcgatcagaattctcaactctccatgaagattggttgaagaccttagtaagcgtc
tcacaaattggaaattgtaattttgagaatgacgatgtttatgacacattgttttgcttg
tggcatgaactaaagagctcataccaatcgtgtaactga
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