Manihot esculenta (cassava): 110611280
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Entry
110611280 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110611280 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
110611280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110611280
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110611280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
Motif
Other DBs
NCBI-GeneID:
110611280
NCBI-ProteinID:
XP_021607190
LinkDB
All DBs
Position
3:7612745..7668021
Genome browser
AA seq
2557 aa
AA seq
DB search
MDKETELLSRLAANHLHLSQFEPLRATLLALRSKNPDLALAILQTVVTNSGRFENILWSP
SCPSPSLLTYLATIELLQYSNSTSQTWSFDPGTLRLRAEFLLLVQVISDMVTENMRKNVD
LESIEREKENDDDFSEKERIGGREELLGRTRSEDLKDVGGELGGCLQVLDKVLDLGVKRL
KPDVGPDANGAVKEEQGSERRAESAVCSVEEGEIMCLKRVVLDHSDVFEALCWNIEQQLK
VDEVENSGLAITVRTDEKASTDFLEGEEEVKVLSLIQRSVQLAHLDAMKECMEAGDEQGS
FSHIRYLHLDRGVDQAEYRTVLQDLLSRVLSRRKGYEVSWHVIQEKLLCIYGEALSSNCR
QIVEIIQVIQDDLLSQEIETSRALDNNQIPPPLERFQSYLTEMKVDLDLNDPVSSLNVVV
SFCMRDMYHYARVSGLHVLECVMDVALSFVKREQLQEASNVLMLFPRLRPLVALMGWDLL
SGKTAARRKLLQLLWTCSKSQVFRLEESSLYSSQVDEISCVEHLCNSLCYQLDLASFVAC
VNSGRSWNSKSSLLLSGNQQIVSGNEDNQSAPFVENFVLERLSVQSPLRVLFDVVPVIKF
QDAIELISMQPIASTAAAWKRMQDIELMHMRYALESIVIALGVMERSMTDERGSHYQAAL
CHLKDLRNHLEAITNIPRKILMVNVIISLLHMDGISLNLMHCASLGSNSESPSTCQWEHT
NVTTCEGGNELVISFTGLLLDILRRNLPLGVIDEHALNDTMNTGGRQALEWRISIAKHFI
EDWQWRLSILQRLLPLSDRQWRWKEALTVLRAAPSKLLNLCMQRAKYDIGEEAVHRFSLS
AEDRATLELAEWVDGAFRRASESRLVEDAVSRAADGTSSGQDLDFSSLRSQLGPLAAILL
CIDVAATCARSTNVSQQLLDQAQVMLSEIYPGGSPKTGSTYWDQIHEVGVISVSRRVLKR
LHELLEQDENPGLQAILSGEIIISTSKELTHQGQKDRALAMLHQMIEDAHKGKRQFLSGK
IHNLARAIADEEAELNFIKGDHQHVERKPLADLDKDGVLGLGLKAVKHMTISSGGGESST
QPVGYDLKDAGSGKRFFGSLSAKPTTYLSQFILHIAAIGDIVDGTDTTHDFNFFSLVFEW
PKDLLTRLVFDRGSTDAASKVAEIMCADFVHEVISACVPPVYPPRSGRGWACIPVIPAYP
KSCSDNKLLSASFKEAKPNCYSCPSVTPGVPLYPLQLDVVKHLVKLSPVRAVLACVFGSG
ILNSSSDSAISSSLDDGLLPAPDSDRLFYEFALDQSERFPTLNRWIQMQTNRHRVSEVAV
TSKHKTNKDDVKNDTRTAIKRLREHDNSDTELEIDDIVSGSNLSAALPDLSIEGGAAPGP
QQDSSKSDYVESDTTVYLSLDWENEEPYEKAVERLIGEGKLMDALALSDRFLRDGASDLL
LQLLIERGEENLPMSGQPQSYGGQSIWSNSWQYCLRLKNKQLAARLALKYMHRWELDAAL
DVLTMCSCHLPENDAVRNEVLHTRQALQRYSHILSADDHYSSWQEVEAECKVDPEGLALR
LAGKGAVSAALEVAESSGLSIALRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDSD
DALPVAMGAMQLLPNLRSKQLLVHFFLKRRDGNLSDVEVVRLNSWALGLRVLAALPLPWQ
QRCSSLHEHPHLILEVLLMRKQLQSAALILKEFPSLRDNSVIVSYATKAIAVSISSPPRE
PRISVSGTRPKPKTKTGVPARSSFSSSLSNLHKEARRAFSWTPRNTGDKNTPKDVYRKRK
SSGLPPSERVAWEAMAGIQEDRVASYSADGQERLPSVSIAEEWMLTGDASKDEAVRAAHR
YESAPDIILFKALLSLSSDELVSAKSALDLCMNQMKNVLNSHQLPANASMETIGRAYHAT
ETFVQGLFYSKSLLRKLVGGNDLSSNSERSKDADDASSDAGSSSMGSQSTDEVSEILSLA
DTWLGRAELLQSLLGSGIAASLDDIADKESSAHLRDRLILDEQYSMAVYTCRKCKIDVFP
VWNAWGHALNRMEHYAQARVKFKQALQFYKGDPAPVILEIINTIEGGPPVDVSDVRSMYE
HLARSAPTILDDSLSADSYLNVLYMPSTFPRSERSRRFQESISNNSAYNTDFEDGPRSNL
DSIRYLECVNYLQEYARQHLLGFMFRHGRYTDACILFFPPNAISPPPQPSAMGAVASSSS
PQRPDPLATDYGTIDDLCDLCIGYGAMSVLEEVISTRMASAKQEDVAVIQHVTTALARIC
SYCETHKHFNYLYKFQVIKKDFVAAGLCCIQLFMNSSSQEEAVQHLEHAKMHFDEGLSAR
YKGGESTKLVTKGVRGKSASEKLTEEGLVKFSARVSIQLEVVKSSNNPDGPQWKLSLFGN
PNDPETFRRRCEIAEKLVEKNFDLAFQVIYEFNLPAVDIYAGVAASLAERKKGSQLTEFF
RNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQI
ASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaaccgagctcctatcgcgcctcgccgcgaaccaccttcatttgtctcaa
ttcgagccactgcgagctactctgttagctctccgatctaaaaaccctgacctagccctc
gcaattctccaaaccgtagttaccaattctggccgcttcgagaacatcctctggtcacca
tcctgcccatcgccttctctcctcacctatctagccaccatagagctcttgcaatacagt
aactccacgtcgcagacatggagcttcgatcctggtaccttgcgattgcgcgctgagttc
ctgttattggttcaagtgatcagcgacatggtgacggagaacatgcgaaagaatgttgac
ttggagagcattgaaagggagaaggagaatgatgatgattttagtgagaaagagagaatt
ggggggcgagaggagttgttgggtagaactagaagcgaggatttgaaggacgtgggcggc
gaattggggggttgcttgcaggttttggataaggttttggatttgggggtgaagagattg
aagccagatgttggtcctgatgcgaatggtgccgttaaggaggagcaagggagcgagaga
agggcggaatctgctgtttgttccgttgaggaaggggaaataatgtgtttgaagagggta
gttttagatcactctgatgtttttgaagcactgtgctggaatatagagcaacaattgaag
gtggatgaggttgagaattcaggtttagctataactgtgaggacggacgagaaagcgagt
acggattttttggagggggaagaggaggtgaaggtgctttctctgattcaaagaagcgtt
cagttagcacatttagatgcgatgaaagagtgcatggaggcaggagatgaacaaggatcc
ttttctcacattcgttatcttcaccttgatcgtggtgtggaccaggctgaatatcgcacg
gttttgcaagatctcctttcgagggtgttgtcaagaaggaaaggatatgaagtctcttgg
catgtcatacaagaaaagttgctatgtatttatggagaggctctttcatcgaattgtaga
caaattgttgaaataattcaggttatccaggatgacttgctaagtcaagagattgagacc
tcccgggcacttgacaacaaccaaattccaccccctttagagcgctttcaaagttatcta
actgaaatgaaagtggatttggatttaaatgatccagtttcatcattgaatgttgtagtc
agtttttgcatgagagacatgtaccattatgctcgtgtctctggcttacatgtccttgaa
tgtgtcatggatgtggcactctcatttgtcaagagggagcagcttcaagaggctagcaat
gtccttatgttatttccacgacttagacctctggtagctctgatgggttgggatctgtta
tctggtaagaccgcagctagaaggaaactactgcaacttctctggacctgtagtaagtcc
caagtatttcggttggaagaatcttcactatacagtagtcaagtggatgagatatcttgt
gtggaacatctgtgcaattcattgtgttatcagcttgatcttgcctcttttgttgcttgt
gtcaattctggtcgatcatggaattcaaaatcctcactgttgttgtctgggaaccagcaa
atagtgtctggaaatgaagataatcaatcagcaccttttgttgaaaactttgtgctggaa
aggctttctgttcagagtccacttcgggtgctttttgatgttgttccagtcataaaattt
caggatgctattgaattaattagcatgcagccgattgcttctactgcagcagcctggaaa
aggatgcaagacattgaacttatgcatatgcgctatgccctggaatctattgttattgca
cttggagtaatggaaaggtctatgactgatgaaagagggagtcattatcaagcagcatta
tgccatttgaaagatctgaggaaccacttggaggctattacaaatattcctcgaaagata
ttgatggtgaatgttataatttcgcttttacatatggatggtatctctctcaatttgatg
cattgtgcctcactagggagcaattctgaatcaccctctacatgtcaatgggagcatacc
aatgtcactacttgtgaagggggaaacgaactagttatttctttcacaggattgttactt
gatatcttgcgtcgcaatcttccactaggtgtcattgatgagcatgcactaaatgatacc
atgaatacagggggaagacaggcattagagtggagaatatctattgctaaacatttcatt
gaagattggcaatggcggttgtcaattttgcagcgtcttctaccattatcggatcgccaa
tggagatggaaggaggcattgactgttttacgtgcggccccatccaagcttcttaacctt
tgcatgcaaagggcaaaatatgatattggcgaagaagcagttcatcgattttcattatct
gcagaagatagagctaccctggaattggctgaatgggttgatggtgctttcagaagagca
tctgaatccagattggtagaagatgcagtatctcgtgctgctgatggcacttcatctggg
caagacctagatttttcttctttgcgttcacagttgggtcctttggctgcaattcttcta
tgtattgatgttgctgcaacttgtgcgagatcgacaaatgtgtcgcaacaacttctggat
caggctcaagtcatgttatctgagatctatcctggaggttctccaaagacaggctcgacc
tactgggatcagatccatgaagtgggagttatttctgtgtctcgacgtgtactcaagcgt
ttgcatgagttgttggaacaagatgaaaatccgggcctccaagcaattctgtctggggag
attattatttcaacatcaaaggagttgactcatcaggggcaaaaggatcgtgcccttgct
atgctacaccagatgattgaagatgctcacaagggcaagaggcaatttctcagtggtaag
attcataatcttgcaagagctattgctgatgaagaagcagagttgaattttataaaaggt
gatcaccaacacgtggaacggaaacctttggctgatcttgacaaggatggggttcttggg
cttgggttaaaagctgtcaaacatatgaccataagttcaggtggtggagaaagtagcaca
cagcctgttggctatgatttaaaggatgctggtagtgggaagagattttttggttcatta
agtgccaagcctactacatatctatcacaattcattctccatattgcggcaattggagac
atagttgatgggactgatacaacccacgatttcaactttttctctcttgtttttgagtgg
cctaaagatcttctaactcgtctggtctttgaccgaggcagcactgatgcagctagtaag
gtagctgagatcatgtgtgcagattttgttcatgaagttatatcagcatgtgtaccacct
gtttatccaccacgatctggtcgtggatgggcatgcattcctgtcattcctgcttaccca
aaaagttgctcggataataaattactttccgcatcctttaaagaagctaagcctaattgc
tatagttgcccatcagtaactcctggagtccctctgtaccctctgcagttggatgttgta
aaacatttggttaaactatcccctgtgagggctgtgttagcatgtgtttttgggagtggt
atcttaaatagcagtagtgactccgctatatctagttccttggatgatggattattgcca
gcacctgacagtgacagactattttatgagtttgctcttgatcagtctgaaaggttccct
actttgaaccgatggatacaaatgcaaactaaccgacatcgagtttcagaagttgctgta
acatctaagcataagactaataaggatgacgttaaaaatgacacaagaactgccatcaag
agacttcgtgagcatgataatagtgatactgagttggaaattgatgacatcgtcagtggc
agtaatctttcagccgctttgccagacctcagcattgaaggtggtgccgctcctggtcca
cagcaggattcctcaaaatctgattatgttgaaagtgatactacagtatatctttcattg
gattgggaaaatgaagaaccttatgagaaagcagtagagagattgattggtgaagggaaa
ctgatggatgctcttgcactttcggatcgttttttgcgtgatggagcctcagatttgtta
ctccaactgctcattgaacgtggagaagaaaaccttccaatgtctggacagcctcaaagt
tatggaggccaaagcatctggagcaatagctggcagtattgcctgcgtttgaagaataaa
caattggcagctagacttgccctcaagtatatgcacaggtgggaacttgatgctgctcta
gatgtactcacaatgtgtagctgccaccttcctgagaatgatgcagttaggaatgaggta
ttgcacacaagacaagctttgcagaggtacagccatatattgagtgctgatgatcattat
agtagctggcaagaggttgaagcagagtgtaaggtagatcctgaaggattagcacttaga
ttggctgggaaaggagctgtttctgcagctctggaagtggctgagagttcagggctatca
atagctttgcgaagagaacttcagggtcgacaacttgtgaagcttctcactgcagaccct
cttaatggtggaggtcctgcagaagcttcacgctttctttcttcattacgtgattctgat
gatgctttaccagttgcaatgggtgcaatgcagctattaccaaatctgcggtcaaagcaa
cttcttgttcacttcttccttaaacgaagagatgggaatctgtcagatgttgaggttgtg
cggcttaattcatgggctttaggacttcgtgttcttgctgccttgccattgccatggcag
caaagatgctcttccttgcatgagcacccacatctaatactggaggttctactgatgaga
aaacagttgcaatctgctgctctgatccttaaagaatttccatcgctcagagacaatagt
gtcattgtttcatatgccactaaagcaattgctgtgagtataagttctcccccaagagaa
ccgcggatttctgtatctggaacaagaccaaaaccaaaaacaaaaacaggtgtgcctgca
aggtcatcttttagtagcagcttaagtaacttgcacaaagaagctcgcagagctttttct
tggactccacggaatactggagataagaatactccaaaagatgtatatcgtaagcgaaaa
agttctgggttgccaccatctgaaagagttgcttgggaggcaatggctggaattcaagag
gatcgggttgcatcgtattctgcagatggacaggaaagactcccttctgtttctattgct
gaggaatggatgctaactggtgatgctagtaaagatgaggctgttcgtgctgcacaccga
tatgaaagtgctccagatattatactttttaaggctctactttcattgtcttctgatgag
ttggtgtcggccaaaagtgctctggacttgtgcatgaatcagatgaagaatgtgttgaac
tcacaccagttacctgcgaatgcatccatggaaacaattggtcgggcatatcatgctact
gagacatttgtacaggggctattttattctaaatccttgttgaggaagcttgttgggggg
aatgacttgtctagtaattctgaaagaagtaaggatgcggatgatgcatcttcagatgct
ggtagctctagcatgggtagtcagtccacagatgaggtctctgaaatcttgtcactggca
gacacttggcttggacgtgctgagttgcttcaaagcctattgggatctggaattgcggct
tctcttgatgatattgctgataaagagtcatctgcccatctccgtgataggttgattctt
gatgaacagtacagtatggctgtatacacctgcaggaagtgtaagattgatgttttccct
gtgtggaatgcatggggacatgctttgaataggatggagcactatgctcaagctcgtgta
aagttcaagcaagctcttcaattttacaagggggacccagcacctgtaattctagagatc
attaatacaattgaagggggtccaccagtagatgtgtctgatgttcgttctatgtatgaa
catttggctagaagtgctccaacaatattggatgattcactttctgctgattcatatctc
aatgttctgtacatgccatctacatttccacgttcagaaagatccaggcgtttccaagaa
tctatatccaataattcagcatataacactgactttgaagatggacctcgcagcaatctg
gatagtattcgctatcttgagtgtgttaattacttacaagaatatgctcgtcagcatttg
cttggatttatgttcaggcatggtcgctatactgatgcctgcatattgttctttcctcct
aatgctatttcgccacctcctcaaccttcggcaatgggagcagtagcttcatcttcatca
cctcaaagaccagatcctttagctactgattatgggactattgatgatttatgtgacttg
tgtattggttatggtgcaatgtctgttcttgaggaagtgatttcgacgagaatggcatct
gcaaaacaggaggatgtagcagtaattcagcatgttactactgcccttgctcgtatttgc
agctactgtgaaactcataagcatttcaactatttatacaagtttcaggtaatcaagaag
gactttgttgctgctggactttgctgtattcagttgtttatgaattcttcttcccaagag
gaagctgttcaacacttggaacatgcaaagatgcattttgatgaaggattatctgctcga
tataaaggtggggaatctactaagcttgtcacgaagggtgtgaggggaaaaagtgcctcc
gagaagctcactgaagaaggacttgtcaagttttctgctcgagtatcaatccagctggaa
gttgtgaaatcctcaaataatccagatgggccacagtggaaactttcactttttggtaat
ccaaatgatcctgaaaccttcaggaggaggtgtgagattgcagagaagctagtcgagaag
aactttgatttggctttccaagtaatttatgaatttaatcttccagctgttgatatatat
gctggtgttgctgcatcactagctgagagaaaaaaaggcagccagttgacagagtttttt
agaaacataaaaggaaccatagatgatgatgattgggatcaggtcttgggggctgcaata
aatgtatatgcaaataaacacaaagaacggcctgaccgtctcatcgacatgttaaccagc
agtcataggaaggtgttagcctgtgttgtctgtggtcgtctgaaaagtgcgtttcagata
gcttctcgaagtggaagtgttgcagatgttcaatatgtagctcatcaggcattgcatgca
aatgcactaccggtgctcgatatgtgtaaacaatggttggcacaatatatgtaa
DBGET
integrated database retrieval system
