Manihot esculenta (cassava): 110611327
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Entry
110611327 CDS
T05761
Name
(RefSeq) nuclear transcription factor Y subunit C-9
KO
K08066
nuclear transcription factor Y, gamma
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110611327
Transcription factors [BR:
mesc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
110611327
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
SusD-like_3
Sigma54_CBD
Motif
Other DBs
NCBI-GeneID:
110611327
NCBI-ProteinID:
XP_021607269
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Position
3:complement(30450541..30452683)
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AA seq
254 aa
AA seq
DB search
MDQRGHGQASAPGEVRSTAPVPYGISYQPNQMMGAAATGSLPSAAQPAGVAASQAQHQLA
YQHIHQQQQEQLQQQLQTFWTNQYQEIEQVNDFKNHSLPLARIKKIMKADEDVRMISAEA
PVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTEIFDFLVDIVPREDLKD
EVLASVPRGSLPIGGPAEAIPYYYMSPQFAPQVAPPGMGVGQPVVDQNLYGQHSRPYAAQ
PIWPQQQPQPPADS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagagggcacgggcaggcgtctgcaccaggcgaggttagaagtacagctcca
gttccatatggcatatcgtatcaacctaaccagatgatgggagctgctgctactggatca
cttccatctgctgctcagccagcaggtgtcgctgcgtctcaagctcagcaccaacttgcc
tatcagcatatccaccagcaacagcaagagcaactgcagcagcaactccagactttttgg
acaaatcagtaccaagaaattgagcaggtaaatgattttaagaatcacagcctgccgttg
gctaggattaagaagattatgaaggcagatgaagatgtaaggatgatatcagctgaagct
ccagttatatttgctagagcctgtgagatgttcattttggaattaacattgcggtcttgg
aatcacacggaggagaacaaaaggaggacactccaaaagaatgatattgctgcagcaatt
actaggactgaaatttttgattttctagttgatattgtgccaagggaagatttgaaagat
gaagtgttagcctcagtcccaagagggagccttccgattggaggcccagctgaagcaata
ccttactattacatgtcacctcagtttgcaccacaggttgcccctcctgggatgggtgtt
ggtcagcctgtggtggatcaaaatctgtatggccaacatagtcgtccttatgctgcgcag
ccaatttggccacagcaacagccgcagccacctgctgactcttga
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