Manihot esculenta (cassava): 110611345
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Entry
110611345 CDS
T05761
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110611345
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mesc01009
]
110611345
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110611345
03036 Chromosome and associated proteins [BR:
mesc03036
]
110611345
Protein phosphatases and associated proteins [BR:
mesc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110611345
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110611345
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110611345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
110611345
NCBI-ProteinID:
XP_021607304
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All DBs
Position
3:complement(28982338..28992798)
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AA seq
540 aa
AA seq
DB search
MVDMEGVVGDMASLDPDILQLPELSPFALKANPYLAEELFSQWLSLPDSSRLVKTLLADV
KTGTPLNALGNSTSTNVMLTNSLPSMFAAGSTPPLSPRSSSGYPRLKQRTGPSSLGSSLK
LASEPVREVIPQFYFQNGRPPTTGMKEQCLFEINQHFYGRLDGLQEHEFKSITKSFCKLP
SFFSTALFRKIDTKGAGVVTRDQFIDYWMRGNFLTMDLPTRIYRVLKQPDQGYITQSDFK
PVLREILATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGTGQLTLRELKRGNLITAM
QHLDEEDDINKILRYFSYEHFYVIYCKFWELDTDHDFSIDKENLIRYGNHALTYRIVDRI
FSQGPRKFTSKVEGKMGYEDFVYFILAEEDKSSESSLEYWFKCIDMDGNGILTSNEMQFF
YEEQLHRMECMAQEPVLFEDILCQIFDMIGPENEGYVTLRDVKSSKLSGHVFNILFNLNK
FIAFESRDAFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSVDIWDEPFEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatggaaggtgtggtaggtgacatggcctcgttggacccggatattctacag
ctacctgaattatcaccgttcgcgctgaaagccaatccatatcttgctgaagaactcttc
tcgcagtggctttcccttcctgatagttccagattggtgaaaactttgctcgcggatgtg
aagacagggactcccttgaatgcccttgggaattctactagcacgaatgttatgctgacc
aattcattaccgtctatgtttgctgctggcagcactccaccactttcaccccgtagttca
tctggttatccacgtctgaaacagaggactggtccctcgtctttgggttcttcactaaaa
ctagctagtgaaccggtacgagaagtcatacctcagttttattttcaaaatggtcgtcca
cctacaactggaatgaaagaacaatgcttatttgaaattaatcagcatttttatggtcgc
ttggatggactgcaagaacatgagtttaagtcaatcaccaagagcttttgcaagcttcca
tcttttttctccactgctctgtttagaaagattgacactaaaggtgctggcgtagtgaca
agggatcagtttattgattattggatgagaggcaacttcttgaccatggatttgccgacc
agaatatatagagttctaaagcaaccagatcagggatacattactcagagtgattttaaa
cctgttttacgagaaattttggcaactcatcccgggttggaatttttgcaaagcacccca
gaatttcaagaaagatatgctgagacggtcatatacagaattttttactatgttaataga
tctggaactggccagcttactctcagggagttgaagcgtgggaacctaatcactgcaatg
cagcatttagatgaggaggatgacattaacaaaattttaaggtacttttcttacgagcac
ttctatgtaatatactgcaaattttgggagctcgacaccgaccatgatttttctattgac
aaagagaaccttatcagatatggtaaccatgctcttacctaccggattgttgatagaatt
ttttctcagggacccaggaaatttactagcaaggtagaagggaagatgggttatgaagat
tttgtttacttcatactagcggaggaggataaatcttctgaatctagcctagagtactgg
ttcaaatgcattgatatggatggcaatggaatcctcacatcaaacgaaatgcagttcttt
tatgaagagcaattgcatcggatggagtgcatggcccaggagcctgtgctctttgaagat
atattatgtcagatttttgacatgattggaccagagaatgagggctatgttaccctacgt
gacgtgaaaagttccaaactctcgggccatgtattcaacattcttttcaatctcaataag
ttcattgcttttgaaagccgtgatgctttcctcattcgtcaggaacgtgagaatccaact
ttgacagagtgggatcgttttgcacatagagaatatataagactttctatggaagaagat
gttgaagatgcttcaaatggaagtgtagatatctgggatgaaccatttgaggctcccttt
tga
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