Manihot esculenta (cassava): 110611366
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Entry
110611366 CDS
T05761
Name
(RefSeq) histone acetyltransferase GCN5 isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110611366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110611366
03036 Chromosome and associated proteins [BR:
mesc03036
]
110611366
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
110611366
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110611366
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
110611366
HAT complexes
PCAF complex
110611366
STAGA complex
110611366
TFTC complex
110611366
SAGA complex
110611366
SLIK complex
110611366
ADA-HAT complex
110611366
HAT-A2 complex
110611366
ATAC complex
110611366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
malic
Motif
Other DBs
NCBI-GeneID:
110611366
NCBI-ProteinID:
XP_021607345
LinkDB
All DBs
Position
1:complement(37499654..37507720)
Genome browser
AA seq
590 aa
AA seq
DB search
MDSHSHPTVPNRSRSSQSPSPSHSASASATSSIHKRKLAAAASAASEDHAPPFPPSSLSA
DTRDGALTSNDDLESISARGADSDSDADDSDAVVDDDEDEFDNDSMRTFTAARLETNAGA
SATGASSGGGGGSSARNTKLKTENSTVKIEKSDGVKDGGTTGTGAVGSTTAGSSVPGIVA
KEDAVKIFTENLQTSGAYSAREESLKREEEAGRLKFLCLSNDGIDEHMVWLIGLKNIFAR
QLPNMPKEYIVRLVMDRSHKSVMVIRRNQVVGGITYRPYVSQKFGEIAFCAITADEQVKG
YGTRLMNHLKQYARDIDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWQGYIKDYDGG
ILMECKIDPKLPYTDLSTMIHRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKILKV
EDIPGLREAGWTPDQWGHSRFNAFNTSTDSATNQRHWTAFMRSLLKSMHDHVDAWPFKEP
VDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANARTYNSPDTIYY
KCATRQCSSPFPLSSSFSVSLLYEFMLCRLEAHFESKVQSGFQSAAKIQQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggactctcactctcacccaaccgtacccaatcgctctcgcagctcccagtctccgtcc
ccttctcactctgcttctgcctccgctacgtcgtctattcataagcgcaagctggctgca
gctgcctcggcggcgtctgaagaccacgcgcctccatttcctccgtcatctttgtccgct
gacacgcgggacggtgcattgacttctaatgacgacctggagagcatctcagcgcgtggc
gctgattctgactctgacgctgacgattcagacgctgtcgtggacgatgatgaagacgag
ttcgacaatgactctatgcgcacgtttactgctgcccgtctggagactaatgctggagcc
tcggctacaggcgctagttcaggtggaggtggcggctcctcggctcgcaacacgaagttg
aagacggaaaattcgacggtaaagattgaaaagtcggatggcgtgaaggatggtggaact
acggggactggtgccgtagggtctaccacagcgggcagctccgtaccagggatagtggca
aaagaggacgctgtaaagatttttaccgagaatttgcaaactagtggtgcttatagcgct
agagaagaaagtttgaagagagaggaggaagcagggagactcaagtttttatgtctttca
aatgatggtattgatgagcatatggtttggttgataggattgaagaacatatttgccagg
caattgcccaacatgccaaaggagtatattgtccgccttgtgatggatagaagccataaa
tccgtaatggttatcagacgtaatcaggttgttggtggcattacatatcgtccatatgtc
agccaaaagtttggggagatagctttttgtgcaatcacagccgatgaacaagtaaaaggt
tacgggacaagattgatgaatcatctgaagcagtatgcacgcgatatagatgggctaaca
cattttctgacctatgctgataataatgctgttggttacttcattaaacagggttttaca
aaagaaatttacttggagaaggatcgatggcaagggtatattaaagactatgatggaggc
attcttatggagtgcaaaattgatccaaaactcccatatactgatttatcgactatgatt
caccgtcaaagacaggcaatcgatgaaaagattagagagctatctaattgtcacattgtt
tacaccggaattgattttcagaagaaagaagctggtattcctaaaaagatcctcaaagtt
gaggatattcctggcttgagggaggctggatggactcctgatcagtggggccattcacgt
ttcaatgcatttaatacttctactgacagtgccacaaatcaaaggcattggactgcattc
atgcgctcacttttaaagtcaatgcatgaccatgttgatgcttggccatttaaggaacca
gttgatgctcgagatgtccctgattattatgacatcatcaaagatccaatggacctgaag
acaatgtcaaaaagggtagaatcagagcagtattatgtaacctttgatatgtttgttgct
gacgtaaagaggatgtttgccaatgcacgcacatataactcacctgataccatttattat
aaatgtgcaaccaggcaatgctcctctcccttccctttgagtagttccttttctgtttca
cttttatatgaatttatgttgtgcaggcttgaagctcatttcgaaagcaaagttcaatca
ggtttccagtcagctgccaaaattcagcagtaa
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